| Protein: | spin-PA |
| Organism: | Drosophila melanogaster |
| Length: | 605 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for spin-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
288.0 | [0..1] | [605..1] |
|
Region A: Residues: [1-95] |
1 11 21 31 41 51
| | | | | |
1 MSLKHQKQSY QPLPTAAAMD NPAMIQSSGS SGSSSSEEGG SREDVANLSP LGLPTTYSSQ 60
61 QLMPSDTDSM EEERHRLRPH HHHHHPLGEH HHIPG
|
| Detection Method: |  |
| Confidence: | 1.01 |
| Match: | 2awzA |
| Description: | Hepatitis C Virus NS5b RNA Polymerase in complex with a covalent inhibitor (5h) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [96-605] |
1 11 21 31 41 51
| | | | | |
1 IPPSAVVPSR LSSVGRSQWF TVTVLCFVNL INYMDRFTIA GVLTDVRNDF DIGNDSAGLL 60
61 QTVFVISYMV CAPIFGYLGD RYSRPWIMAV GVGLWSTTTL LGSFMKQFGW FIAFRALVGI 120
121 GEASYSTIAP TIISDLFVHD MRSKMLALFY FAIPVGSGLG YIVGSKTAHL ANDWRWALRV 180
181 TPILGIVAVF LILLIKDPVR GHSEGSHNLE ATTYKQDIKA LVRNRSFMLS TAGFTCVAFV 240
241 AGALAWWGPS FIYLGMKMQP GNENIVQDDV AFNFGVITML AGLLGVPLGS FLSQYLVKRY 300
301 PTADPVICAF GLLVSAPLLT GACLLVNSNS VGTYALIFFG QLALNLNWAI VADILLYVVV 360
361 PTRRSTAEAF QILISHALGD AGSPYLVGAI SEAIMKHLHK NPSDSGLTTE LRSMSQVAGS 420
421 AISNATQVIA EATTSLMETA RSSASQEYSD VEQFEGLQYA LFSTSFVEVL GGIFFIFTAC 480
481 FIIKDKYNAT RGLQDATAQQ QQRDERGQIA
|
| Detection Method: | |
| Confidence: | 41.0 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| binding | 1.25550149366993 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
