YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: Asph-PA
Organism: Drosophila melanogaster
Length: 785 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Asph-PA.

Description E-value Query
Range
Subject
Range
gi|55238649, gi|... - gi|58387846|ref|XP_315857.2| ENSANGP00000004480 [Anopheles gambiae str. PEST], gi|55238649|gb|EAA119...
362.0 [0..32] [785..26]

Back

Predicted Domain #1
Region A:
Residues: [1-367]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGDVQPRKR KDKRRKRDDD ESSHGVHITK MGNEDLHLHV HHDHGTGGHW CAKIIFFALM  60
   61 AVLLGLVGLI IMENRGLEDL DTPLSESRFS KVFDGWVDEH RDEHDGHDVQ EPSGEALDDH 120
  121 DEHDDHDDHE DEDEEPLTEE LEEELEEEEE PTEEDEPAAD EEYEEDEDEE NNAGENITAE 180
  181 DAEEEEEEED NDDEGTVEAT VEATTEATTE ATGEYEAEED DEDEAAADDD AVESTEAPLS 240
  241 KAEEQEDDED EDEEEQEIEE SVEPERSQYA AQSAPAKDNN DDDDDDDQDK NDADDGDDDE 300
  301 FESLAQQFEN DPEDTVPAKA VESEEQDQDQ ADEEEPKEEG SSWLASQIKP KEAAPAPAEK 360
  361 EDPFEQE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.69897
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [368-785]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LRKANEEMIR ENYAQALRSF NTLTTNFAHE PSAHLGRARL LELLAKKERS NQRLWEAIDA  60
   61 YKRYLAFGEL VASNQEFQTA GESCIENLRF LGHHRQATTI HELLINRLPE DPRLRNQLSL 120
  121 TYLMVNNLQQ VEKVAVETLK LWPNNAVAQL HYGLALRQFH ADYAKALPYL KYAVESGEEG 180
  181 TQEAFFYLSL GETMQRLSMK SEALEVYGKG VAKGFFASLY QRSLYNEPRL RAQPFWQPKE 240
  241 TGYERQLEKL TLNWRAIRDE GLALLGRSGF FEDEAELLRD KGVWQQYELY AQGRRVKDNC 300
  301 RRAPITCSLL EEFPESAGCR RGQVKFSVMQ AKTHVWPHCG PTNCRLRAHL TLAAPEPEKA 360
  361 SLRVAEQERT WREGELFIFD DSFEHEVWHN GSQSRLVLIL DMWHPQLSAA QRRSLSPI

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.72
Match: 1w3bA
Description: The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle