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View Structure Prediction Details

Protein: CG8192-PA
Organism: Drosophila melanogaster
Length: 431 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8192-PA.

Description E-value Query
Range
Subject
Range
gi|17862066 - gi|17862066|gb|AAL39510.1| LD06965p [Drosophila melanogaster]
289.0 [0..1] [431..1]

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Predicted Domain #1
Region A:
Residues: [1-92]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHIPSAVLLV LAVSTGLWAC CVEGASTGSP SATATTAKPK GFEARSLDVN SSGGEEELDD  60
   61 FETQAQTHLA YRQQPQQQRQ LYEYSEEDQE EA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [93-201]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PRPVYANRNA KQQSNYLKIQ GQLKKPLSEE SEEEEEEVEE PDRLSTLLSK SSFSCTDRNS  60
   61 GYYADESLSC EVFHYCQESQ KHSWICPEGF TFHQIHLICM PPSHDNICK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.30103
Match: 1wawA
Description: Specificity and affnity of natural product cyclopentapeptide inhibitor Argadin against human chitinase
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [202-320]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QSSKYHIVND YLYKPINLQE HQSKPNVTLR YSERYFPENY YEHERYDDEE EQLPAAPRPR  60
   61 IQQQHHQQQH QQPQQQHRQV LAYQQPQQQP QVRVQYQQPQ QHQHHQQQAQ PQAQVVTQI

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.1
Match: 2j63A
Description: No description for 2j63A was found.

Predicted Domain #4
Region A:
Residues: [321-431]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RHQPQPQPTT LAYRKPQPVT TVQPQLQLHQ LHQPQLQLHQ QRPQTLAPTV TPAPYRFFTA  60
   61 APQLQHLQQQ QQQVFRTPEE INISLQQRRP QVFIATTPRY YEDEYLYERR K

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle