| Protein: | Pms2-PA |
| Organism: | Drosophila melanogaster |
| Length: | 899 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Pms2-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
531.0 | [0..1] | [899..1] |
|
Region A: Residues: [1-407] |
1 11 21 31 41 51
| | | | | |
1 MLETNYNADT EEEPDVPPPT TALSGQIKAI GKDTVHKICS GQVVLSLAVA VKELVENSID 60
61 AGATLVEIKL KDQGLQSVEV SDNGSGVEEM NLEGMTAKYH TSKIREFVDL LGVETFGFRG 120
121 EALSSLCALS DMVIQTRHKS TDVGVKVELD HEGRIKKRSP CARGVGTTVL LANLFSTLPV 180
181 RRRDFTRNIK KEFTKMCQIL QAYCLVTKGV RILCSNHTPK GAKTIVLQTH GDQEVMANIS 240
241 AIFGARQAAD LVPLKSPFGQ GQLTEAELRA DLESGADLAD TTSPQISTED VERLNQADFQ 300
301 LEGFISSCRH GAGRSSRDRQ FFFVNSRPCD PKNIAKVMNE VYHRYNVQQQ PFIYLNIITA 360
361 RSDVDVNLTP DKRQLLINNE RILLLALKKS LLDTFGQTPA TFQMQNT
|
| Detection Method: |  |
| Confidence: | 73.154902 |
| Match: | 1h7sA |
| Description: | DNA mismatch repair protein PMS2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 2.4793446884777 | bayes_pls_golite062009 |
| protein kinase activity | 1.48094914662788 | bayes_pls_golite062009 |
| signal transducer activity | 1.37080468175244 | bayes_pls_golite062009 |
| molecular transducer activity | 1.37080468175244 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.36033057569078 | bayes_pls_golite062009 |
| kinase activity | 1.31787290977231 | bayes_pls_golite062009 |
| transferase activity | 1.29436538270168 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.22121888219398 | bayes_pls_golite062009 |
| mismatched DNA binding | 1.18608754652723 | bayes_pls_golite062009 |
| DNA topoisomerase activity | 0.50902250105843 | bayes_pls_golite062009 |
| DNA topoisomerase (ATP-hydrolyzing) activity | 0.44633100500042 | bayes_pls_golite062009 |
| DNA insertion or deletion binding | 0.0855237893557499 | bayes_pls_golite062009 |
| mismatch repair complex binding | 0.0315838449561099 | bayes_pls_golite062009 |
|
Region A: Residues: [408-649] |
1 11 21 31 41 51
| | | | | |
1 TIVSMLEPKT NSGKTKFPKE SSKDDQHEEV SEEDVPTTST QRFMDVLTQW RRTGDTKGTA 60
61 PSVPVKRRCS ESEELVTRTL KMQKIHTFLS QESPNEQSSK CEAESDAASD VDMAKKDKTQ 120
121 VSLDNSFLNL KELAKESEAY DLLTKPQNTP RIDCKVLTPI KSRRSIFEFK TDAMALDKQE 180
181 SPAELNSQPP SFTQLSEETD IASDEDDHIE LPTRIEFDEE MEEGLPSNFS SGEITTSLEE 240
241 IA
|
| Detection Method: | |
| Confidence: | 6.69897 |
| Match: | 2cgeA |
| Description: | No description for 2cgeA was found. |
|
Region A: Residues: [650-899] |
1 11 21 31 41 51
| | | | | |
1 SSLKAHEQQQ RDRRTRTKLQ RLRFKTEINP NQNTSAEAEL QREIDKEDFA RMEIIGQFNL 60
61 GFIIVKLEDD LFIVDQHATD EKYNFETLQR TTQLEYQRLA VPQNLELTAV NEMVLLNHID 120
121 VFEKNGFKFE VDHEAPATKK VRLLGKPHSK RWEFGKEDID ELIFMLQDAP EGTICRPSRV 180
181 RAMFASRACR KSVMIGTALS RNTTMRRLIT QMGEIEQPWN CPHGRPTMRH LINIAMLINS 240
241 DENDEQEPPA
|
| Detection Method: | |
| Confidence: | 24.69897 |
| Match: | 1x9zA |
| Description: | Crystal structure of the MutL C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
