| Protein: | CG17386-PA, FBpp... |
| Organism: | Drosophila melanogaster |
| Length: | 867 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG17386-PA, FBpp....
| Description | E-value | Query Range |
Subject Range |
|
|
536.0 | [0..1] | [867..1] |
|
Region A: Residues: [1-207] |
1 11 21 31 41 51
| | | | | |
1 MSSPRDKAEQ VYEVKAPHAG AEGHTFLVSP VDPTPILAPI LTAVPVMKAP DSPASMDKTK 60
61 EMEELDDEQP SCSSQAVVPL SSSLPCKLLR MHARRSAQAL LHQMESMDSQ LGSSNGSTSE 120
121 DTSPSAPPMS PTDHQLVDVG MGSSIGDSDE SSEEGDELKP LAVDNHIIAE VDLTERQTTP 180
181 PAVLSEANLE KFRKHQMDNI YLHPNFT
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [208-276] |
1 11 21 31 41 51
| | | | | |
1 LDASPPPAVA PANSPVLEAK RTHRSFLTMK KEKEVEPPQE KEQEVPVHQE QDTEPQGPNE 60
61 IDTLDPSLI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [277-483] |
1 11 21 31 41 51
| | | | | |
1 PSEELAAEIT DAVEFYFSNE SILKDAFLLK HVRRNKEGFV SLKLVSSFKR VRQLTREWKV 60
61 VGDAVRRKSR KIELNDVGTK VRRIEPLPSF DETMPSRTIV ACDLPLDKLT IEKVSDLFSP 120
121 CGEIALIRIL KPGMAIPVDV RQFMNKYPEL QQKECALVEY LESSSARDAR HLNGPFQVYE 180
181 MVAPKKKTGK KAAVIQIAAP VARMVEN
|
| Detection Method: | |
| Confidence: | 32.0 |
| Match: | 1ytyA |
| Description: | Structural basis for recognition of UUUOH 3'-terminii of nascent RNA pol III transcripts by La autoantigen |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [484-637] |
1 11 21 31 41 51
| | | | | |
1 YRYYNDANYE RSRGGSFSGH ETVPDLRFKL KRNNSDFQPS YYQQTGPSYH ANPYQHYQPR 60
61 GSIGNQNQEV GPNGFFGYGP RRYSNTSTIS ANTAAALGDV SPISSAVNSG GNPMVSGISS 120
121 LQRRLSNCSE QNYTPEVNPS MSRRASNCSE TGGV
|
| Detection Method: | |
| Confidence: | 1.11 |
| Match: | 1rpyA |
| Description: | CRYSTAL STRUCTURE OF THE DIMERIC SH2 DOMAIN OF APS |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.322032621007217 | bayes_pls_golite062009 |
| protein binding | 0.148876511909407 | bayes_pls_golite062009 |
|
Region A: Residues: [638-781] |
1 11 21 31 41 51
| | | | | |
1 PQRRDSNCSE SCPCSRRVSD FAQTTDTSYR KTSVCSNGSC PGNNQNQERR FSNGSMQFER 60
61 TFSNASESSG FYRRPSNDFN IEREPIQTDQ LVGGGGGGYQ VWPRRYSNNF QQLSSKLAAY 120
121 DNAQYIGGRR ISTDSGYDRR CSFG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [782-867] |
1 11 21 31 41 51
| | | | | |
1 SEGFEGSPRS RTGSFLSNYK HGGGDGYDGQ PRSRTGSFLD GSPRSRSGSF AQRAAESLVR 60
61 TPMGPDGSKG FGQRARKFGQ TISPVN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
