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View Structure Prediction Details

Protein: Sin1-PA
Organism: Drosophila melanogaster
Length: 569 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Sin1-PA.

Description E-value Query
Range
Subject
Range
SIN1_DROPS - Stress-activated map kinase-interacting protein 1 OS=Drosophila pseudoobscura pseudoobscura GN=Sin1 ...
gi|54635701, gi|... - gi|54635701|gb|EAL25104.1| GA10075-PA [Drosophila pseudoobscura], gi|125807826|ref|XP_001360529.1| G...
666.0 [0..1] [568..1]

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Predicted Domain #1
Region A:
Residues: [1-144]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATYSNQHWL LSHIRNSFIS TDDTGMCETV MLSDDMPKHY LRKFGNSGAG GDHYHWRRAH  60
   61 KTPPTGGGTT PERNTRHPDA PLQEVDFICY PGLDLSDDEE DMSTHSFDIQ MYPEVGAHRF 120
  121 RSNTAQKLEK LDIAKRRAAR IKSV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [145-239]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NYQEEVQPPE SDDFFKRKEL PLSKAERVKN EPKANDDDLS DEGVQSQLTE QLAKSPKQAQ  60
   61 NRFIEFARFD GTSQVGMQTK RINVFLNMLP EPDRN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [240-385]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YPLKICVVAT AKIQEVIGFV CYRTSLQYPD VPLKSLQHYA LYMTEDNDDM EDFPPLDNRE  60
   61 PCSKFGFSQL TLAERRPLAP VTRVDYHSQL GSKSMTSVED KTALSDAAVK ALQNISLNGG 120
  121 TSDPGGGGGG GDSPHDNVKE YEKRLL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [386-569]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NHNDMLEAPM HRTFRLNIID KRFFKSDVTL GISGERIEID QCKNAKFWPQ KKPVSTPIDF  60
   61 VAHCEILERR HLKALLRIWL KSNSSSPSFS TGCTSAPINA SVTTLNAGSG SGGIAHSPSS 120
  121 PGHSSGLFSS SNIRFKHYDF DTDTHTAEQI HNKLNCILEM RSSDLRREFL LQRDRKQEKR 180
  181 QLKL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle