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View Structure Prediction Details

Protein: SelD-PA, SelD-PB
Organism: Drosophila melanogaster
Length: 398 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SelD-PA, SelD-PB.

Description E-value Query
Range
Subject
Range
gi|54637058|gb|E... - GA21160-PA [Drosophila pseudoobscura], GA21160 [Drosophila pseudoobscura pseudoobscura]
gi|125811479, gi... - gi|54637058|gb|EAL26461.1| GA21160 [Drosophila pseudoobscura pseudoobscura], gi|125811479|ref|XP_001...
gi|194110812, gi... - gi|195170294|ref|XP_002025948.1| GL10201 [Drosophila persimilis], gi|194110812|gb|EDW32855.1| GL1020...
317.0 [0..1] [398..1]

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Predicted Domain #1
Region A:
Residues: [1-398]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYAADVLNS AHLELHGGGD AELRRPFDPT AHDLDASFRL TRFADLKGRG CKVPQDVLSK  60
   61 LVSALQQDYS AQDQEPQFLN VAIPRIGIGL DCSVIPLRHG GLCLVQTTDF FYPIVDDPYM 120
  121 MGKIACANVL SDLYAMGVTD CDNMLMLLAV STKMTEKERD VVIPLIMRGF KDSALEAGTT 180
  181 VTGGQSVVNP WCTIGGVAST ICQPNEYIVP DNAVVGDVLV LTKPLGTQVA VNAHQWIDQP 240
  241 ERWNRIKLVV SEEDVRKAYH RAMNSMARLN RVAARLMHKY NAHGATDITG FGLLGHAQTL 300
  301 AAHQKKDVSF VIHNLPVIAK MAAVAKACGN MFQLLQGHSA ETSGGLLICL PREQAAAYCK 360
  361 DIEKQEGYQA WIIGIVEKGN KTARIIDKPR VIEVPAKD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 77.522879
Match: 1cliA
Description: Aminoimidazole ribonucleotide synthetase (PurM) N-terminal domain; Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle