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View Structure Prediction Details

Protein: FBpp0308974, FBp...
Organism: Drosophila melanogaster
Length: 155 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0308974, FBp....

Description E-value Query
Range
Subject
Range
CG17218-PA - This gene is referred to in FlyBase by the symbol Dmel\CG17218 (CG17218, FBgn0032421). It is a prote...
144.0 [0..1] [146..1]
gi|195148204, gi... - gi|195148204|ref|XP_002015064.1| GL18618 [Drosophila persimilis], gi|194107017|gb|EDW29060.1| GL1861...
gi|54645082|gb|E... - GA14397-PA [Drosophila pseudoobscura], GA14397 [Drosophila pseudoobscura pseudoobscura]
gi|125985987, gi... - gi|54645082|gb|EAL33822.1| GA14397 [Drosophila pseudoobscura pseudoobscura], gi|125985987|ref|XP_001...
131.0 [0..1] [123..1]
gi|33328931 - gi|33328931|gb|AAQ09872.1| CG9336 [Drosophila yakuba]
125.0 [0..1] [145..1]
gi|58386410, gi|... - gi|58386410|ref|XP_314738.2| ENSANGP00000013040 [Anopheles gambiae str. PEST], gi|55239828|gb|EAA102...
124.0 [0..4] [123..64]

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Predicted Domain #1
Region A:
Residues: [1-155]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPFMEKTLL LLGVLCCIQV TTALMCYDCN SEFDPRCGDP FEPYSIGEVN CSKQEPLEHL  60
   61 KDKYKPTLCR KTVQKIYGKT RIVRGCGYIP DENTDNKCVR RSGTHDVAAI YCSCTKDLCN 120
  121 GANSPAGQWM MLPLIVAAGL ALLLNSRHTI RFQSS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.29
Match: 1ywhA
Description: crystal structure of urokinase plasminogen activator receptor
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle