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View Structure Prediction Details

Protein: Cpr50Cb-PA
Organism: Drosophila melanogaster
Length: 178 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Cpr50Cb-PA.

Description E-value Query
Range
Subject
Range
gi|112983758, gi... - gi|12862591|dbj|BAB32481.1| cuticle protein [Bombyx mori], gi|112983758|ref|NP_001036866.1| cuticle ...
132.0 [0..2] [165..1]
gi|54641081, gi|... - gi|54641081|gb|EAL29832.1| GA20079-PA [Drosophila pseudoobscura], gi|125980121|ref|XP_001354093.1| G...
121.0 [0..64] [176..24]
gi|58378630, gi|... - gi|58378630|ref|XP_308909.2| cuticular protein 55, RR-2 family (AGAP006837-PA) [Anopheles gambiae st...
AGAP006837-PA - CPR55: cuticular protein RR-1 family (CPR55)|protein_coding|2L:39151550:39152078:1|gene:AGAP006837
121.0 [0..4] [178..2]
gi|66564779 - gi|66564779|ref|XP_624729.1| PREDICTED: similar to CG1259-PB [Apis mellifera]
119.0 [0..50] [150..184]
gi|24657353, gi|... - gi|7292458|gb|AAF47862.1| CG15007-PA [Drosophila melanogaster], gi|24657353|ref|NP_647873.1| CG15007...
119.0 [0..35] [165..6]
gi|108882505, gi... - gi|157126718|ref|XP_001654719.1| cuticle protein, putative [Aedes aegypti], gi|108882505|gb|EAT46730...
117.0 [0..83] [163..49]

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Predicted Domain #1
Region A:
Residues: [1-67]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSFKSFVLL SLSLAAISAY AYAQIAPGSN AYLPPTKNGY DYSEPKTPFK PGPPGRPAAP  60
   61 GPRPPAP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [68-178]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGTPRNIPGQ PGDDHVHVPG MPYDFEYAVQ DPETANDYAH KASSDGDVVT GEYRVQMPDG  60
   61 RTQIVRYTAD WKTGYHADVS YEGEATYPQG PQPGARGGGG GGAGGAGGYK Y

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 9.958607
Match: PF00379.14
Description: No description for PF00379.14 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.889 N/A N/A b.61.4 Quinohemoprotein amine dehydrogenase A chain, domain 3
View Download 0.859 N/A N/A b.61.4 Quinohemoprotein amine dehydrogenase A chain, domain 3
View Download 0.825 N/A N/A d.233.1 Inhibitor of vertebrate lysozyme, Ivy
View Download 0.818 N/A N/A d.233.1 Inhibitor of vertebrate lysozyme, Ivy
View Download 0.817 N/A N/A d.105.1 Clathrin adaptor appendage, alpha and beta chain-specific domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle