YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG33156-PC
Organism: Drosophila melanogaster
Length: 375 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG33156-PC.

Description E-value Query
Range
Subject
Range
CG33156-PA - This gene is referred to in FlyBase by the symbol Dmel\CG33156 (CG33156, FBgn0053156). It is a prote...
gi|220950314 - gi|220950314|gb|ACL87700.1| CG33156-PA [synthetic construct]
385.0 [0..1] [375..80]

Back

Predicted Domain #1
Region A:
Residues: [1-375]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNSAMVMQI QDPASQRLTW YKPPLTVLVI KKVSDASVLA PFVYLVDWLL QEKNMVVWVE  60
   61 SAVLEDVQLN ENVRFKAIRD KLVTFKDGRD DLTDRIDFIV CLGGDGTLLY ASLLFQQSVP 120
  121 PVMAFHLGSL GFLTPFRFDN FEEQLTSVLE GHAALTLRSR LRCVMHRRSD RKHEAKTLEA 180
  181 DLDGEARPAA NSILVLNEVV IDRGPSPYLS NIDLFLDGKY ITSVQGDGLI VSTPTGSTAY 240
  241 AAAAGASMIH PSVPAIMVTP ICPHSLSFRP IVVPAGVELK ISVSPESRNT SWVSFDGRNR 300
  301 QELFHGDSLR VTTSIYPVPC ICAQDQISDW FASLADGLHW NVRKRQKCLD ELSDLTASGS 360
  361 EDTLDEIENM KLYDV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 83.0
Match: 2an1A
Description: Structural Genomics, The crystal structure of a putative kinase from Salmonella typhimurim LT2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle