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View Structure Prediction Details

Protein: CG6145-PB
Organism: Drosophila melanogaster
Length: 420 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6145-PB.

Description E-value Query
Range
Subject
Range
CG6145-PA - This gene is referred to in FlyBase by the symbol Dmel\CG6145 (CG6145, FBgn0033853). It is a protein...
427.0 [0..1] [420..101]

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Predicted Domain #1
Region A:
Residues: [1-52]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNSAMVMQI QDPASQRLTW YKPPLTVLVI KKKDSQVLPP FVQLVEWLVQ EK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [53-420]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HMVVWVESAV LEDKLLRDDV KLEQESSKFQ KVHQQYAGVR ARFLDLREKL VTFKDGRDDL  60
   61 TDRIDFIVCL GGDGTLLYAS QLFQQSVPPV MAFYLGSLGF LTPFQCDNFQ EQVTNVLEGH 120
  121 AALTLRSRLR CSIHRKGERR KESLLHSVGG NLLIPSFQRQ LNYVELNNGQ TGKAGSNNNN 180
  181 GHNNSILVLN EVVINRGPSP YLSNIDIFLE GKYITSVQGD GLIVSTPTGS TAYAAAAGAS 240
  241 MIHPSVPAIL VTPICPHSLS FRPIVVPAGV ELKISISPDS RNTSRVSFDG RNDQELNHGD 300
  301 SLRVTTSIYP VPSICSQDQI SDWFDSLAEG LHWNVRKRQK CLDELSDLTT SGSEDTLDDF 360
  361 DNLQIYDA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 76.39794
Match: 2an1A
Description: Structural Genomics, The crystal structure of a putative kinase from Salmonella typhimurim LT2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle