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View Structure Prediction Details

Protein: CG6145-PA
Organism: Drosophila melanogaster
Length: 520 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6145-PA.

Description E-value Query
Range
Subject
Range
CG6145-PC - This gene is referred to in FlyBase by the symbol Dmel\CG6145 (CG6145, FBgn0033853). It is a protein...
gi|220951162 - gi|220951162|gb|ACL88124.1| CG6145-PB [synthetic construct]
501.0 [0..27] [520..58]

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Predicted Domain #1
Region A:
Residues: [1-100]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSSSSITVN PAPTTTPSAA QTVPKSASQC NGSYYDDHDN QLLHVNSIRQ GQGGTAASSA  60
   61 PGPDLNNGTA SDDLQMRMWW RTRSLNAPSP FQHFGPCGRI 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [101-520]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNSAMVMQI QDPASQRLTW YKPPLTVLVI KKKDSQVLPP FVQLVEWLVQ EKHMVVWVES  60
   61 AVLEDKLLRD DVKLEQESSK FQKVHQQYAG VRARFLDLRE KLVTFKDGRD DLTDRIDFIV 120
  121 CLGGDGTLLY ASQLFQQSVP PVMAFYLGSL GFLTPFQCDN FQEQVTNVLE GHAALTLRSR 180
  181 LRCSIHRKGE RRKESLLHSV GGNLLIPSFQ RQLNYVELNN GQTGKAGSNN NNGHNNSILV 240
  241 LNEVVINRGP SPYLSNIDIF LEGKYITSVQ GDGLIVSTPT GSTAYAAAAG ASMIHPSVPA 300
  301 ILVTPICPHS LSFRPIVVPA GVELKISISP DSRNTSRVSF DGRNDQELNH GDSLRVTTSI 360
  361 YPVPSICSQD QISDWFDSLA EGLHWNVRKR QKCLDELSDL TTSGSEDTLD DFDNLQIYDA 420
  421 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 80.221849
Match: 2an1A
Description: Structural Genomics, The crystal structure of a putative kinase from Salmonella typhimurim LT2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle