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View Structure Prediction Details

Protein: CG42321-PE, CG42...
Organism: Drosophila melanogaster
Length: 1150 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG42321-PE, CG42....

Description E-value Query
Range
Subject
Range
gi|148705842, gi... - gi|60360628|dbj|BAD90541.1| mKIAA4233 protein [Mus musculus], gi|148705842|gb|EDL37789.1| ATPase, am...
877.0 [0..1] [1148..32]

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Predicted Domain #1
Region A:
Residues: [1-1065]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSIFRFRLP FRRSELPETG LLNTYDEDFT SSAGYDADDG ERRIINLNGP QPTKYGNNRI  60
   61 TTAKYSFISF LPAFLFEQFR RYSNCFFLLI AILQQIPEVS PTGRYTTLVP LMFILSVSAI 120
  121 KEIIEDIKRH RADNEINHRS IERLDSGSWC TVRWSELTVG DIIKVGINTF FPADLILLSS 180
  181 SEPQAMCFIE TANLDGETNL KIRQALPATA ELLETKDLQR LEGRIECELP NRHLYEFNGV 240
  241 LRETGKPPAA LGNDQVLQRG AILRNTAWVF GIVVYSGQET KLMKNSTSAP LKRSTVDKLT 300
  301 NTQILMLFMI LISLCIISGL CNLFWTREHS ETDWYLGLTD FKTKSLGYNL LTFFILYNNL 360
  361 IPISLQVTLE LVRFLQAIFI NYDIEMYHEE SNTPAMARTS NLNEELGMVK YIFSDKTGTL 420
  421 TQNVMEFKKC SIAGYVYTAE RTPEESQLVQ NILGRHETSA VIEEFLELLS VCHTVIPERK 480
  481 ENGNMIYHAA SPDERALVEG AQKFGYIFDT RTPKYVEINA LGVRKRYEVL NVLEFTSSRK 540
  541 RMSLIVRTPE NKIKLFCKGA DTVIYERLAP QGQAFREQTL RHLEEFASDG LRTLCLAVAD 600
  601 IRPDVYQEWS QTFDKASVAL QNRESKLEDA ANLIENNLRL LGATAIEDRL QDGVPETIAS 660
  661 LLDAGIYIWV LTGDKQETAI NIGYSCRLIS HSMDIIILNE ESLDATREVI HRHYGEFKSS 720
  721 SAKDANVALV IDGTTLKYAL SCDLRNDFQD LCILCRVVIC CRVSPMQKAE VVEMVTQSTN 780
  781 AVTLAIGDGA NDVAMIQKAN VGIGISGVEG LQAACASDYS IAQFRYLQRL LLVHGAWNYA 840
  841 RISKLILYSF YKNVCLYVIE LWFAVYSGWS GQILFERWTI GLYNVLFTAM PPFAMGLFEK 900
  901 FCTAETMIRY PMLYKTSQNA KLFNVKVFWI WIFNALLHSV FLFWLPLAAY TKEVIWSDGK 960
  961 TSDYLLMGNL VYTYVIVTVC LKAGLITNSW TWLTHLAIWG SIVLWFGFLL IYSHVWPMFK1020
 1021 FASNFRGMDI QLLSTPVFYF CLMLVPITTL LIDVICKLVH NTVFK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 165.0
Match: 1iwoA
Description: Calcium ATPase, transduction domain A; Calcium ATPase, catalytic domain P; Calcium ATPase; Calcium ATPase, transmembrane domain M
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [1066-1150]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TLTEAVRETE IRRSDISEVM NEPRSSFTET ARLLRNVFTR RANTRVETDL ELSHGYAFSQ  60
   61 EEGGAVPQSI IIRAYDTNLP KPEGN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle