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View Structure Prediction Details

Protein: CG4716-PA, FBpp0...
Organism: Drosophila melanogaster
Length: 223 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG4716-PA, FBpp0....

Description E-value Query
Range
Subject
Range
gi|194177024, gi... - gi|33328845|gb|AAQ09829.1| CG4716 [Drosophila yakuba], gi|195485038|ref|XP_002090923.1| GE12531 [Dro...
277.0 [0..1] [223..1]
CG4716-PB - This gene is referred to in FlyBase by the symbol Dmel\CG4716 (CG4716, FBgn0033820). It is a protein...
156.0 [0..1] [122..1]
gi|66803657 - gi|66803657|gb|AAY56630.1| unknown [Drosophila simulans]
146.0 [0..1] [119..1]

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Predicted Domain #1
Region A:
Residues: [1-131]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRSLLLLAV SAILFCAAVA LPSRLTKSEE DWLEQMLTLS EDSGELQDLD ESTGIHIIKR  60
   61 SAKDASSSSE EHNDKAKDKA KNKADSSGDS SSEEKTTPAA VEETTTEHTA RKRRSTEDTM 120
  121 VRSFCQSLKE F

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [132-223]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DIKNFNLQSA YDRAVSFCKQ RESRRRRQAA DQKSSDAPDL DAQAEKELDE QMAQAVAELL  60
   61 KDKDNTSIED YAQGCEVMEV SSKEANEATY AE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.966 a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle