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View Structure Prediction Details

Protein: AQP-PA
Organism: Drosophila melanogaster
Length: 276 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AQP-PA.

Description E-value Query
Range
Subject
Range
gi|255646628 - gi|255646628|gb|ACU23788.1| unknown [Glycine max]
PIP27_MAIZE - Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1
212.0 [0..23] [262..25]

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Predicted Domain #1
Region A:
Residues: [1-276]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTTALGISA LFMVGCCALA QIARVISRRL VTREGLVPIL INEAIAAAEL CACCFELIIV  60
   61 ADNFGVSMYA VCLFLLTIWW GRVWGDASAC PYTHMEDVVE GRTSFKEMAL RSWAELMGGC 120
  121 CVYRVVQVFW WLELAETHRG RAFEACNADM QVSPYLGAVI EGVATLLCRL ASKTISEKEP 180
  181 RFGSYIDSFI GTSLVVAVYA FNYVLLAAFN FSGGYFNPVL ATALKWGCRG HTHLEHIIVY 240
  241 WIGACAGAVL SIPVFKVPAV RRLLLGEGAA SKSKQE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 52.0
Match: 2b5fA
Description: Crystal structure of the spinach aquaporin SoPIP2;1 in an open conformation to 3.9 resolution
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle