| Protein: | Nmda1-PB, FBpp03... |
| Organism: | Drosophila melanogaster |
| Length: | 313 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Nmda1-PB, FBpp03....
| Description | E-value | Query Range |
Subject Range |
|
|
231.0 | [0..1] | [313..165] |
|
Region A: Residues: [1-138] |
1 11 21 31 41 51
| | | | | |
1 MQDPNQQYNY GGGNPPQGGY GGYPPQGGYP PQGPPQGYPP YAQGGAQPYP QPYGQGPPPG 60
61 GYAPQPGFIQ PPPSAGGYGA YDDPESQPKN FSFDDQSIRR GFIRKVYLIL MGQLIVTFGA 120
121 VALFVYHEGT KTFARNNM
|
| Detection Method: |  |
| Confidence: | 4.522879 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [139-313] |
1 11 21 31 41 51
| | | | | |
1 WLFWVALGVM LVTMLSMACC ESVRRQTPTN FIFLGLFTAA QSFLMGVSAT KYAPKEVLMA 60
61 VGITAAVCLA LTIFALQTKY DFTMMGGILI ACMVVFLIFG IVAIFVKGKI ITLVYASIGA 120
121 LLFSVYLIYD TQLMMGGEHK YSISPEEYIF AALNLYLDII NIFMYILTII GASRD
|
| Detection Method: | |
| Confidence: | 8.568636 |
| Match: | PF01027.11 |
| Description: | No description for PF01027.11 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
