| Protein: | FBpp0305105, Nmd... |
| Organism: | Drosophila melanogaster |
| Length: | 316 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0305105, Nmd....
| Description | E-value | Query Range |
Subject Range |
|
|
232.0 | [0..2] | [316..167] |
|
Region A: Residues: [1-129] |
1 11 21 31 41 51
| | | | | |
1 MSYFADPNQQ YNYGGGNPPQ GGYGGYPPQG GYPPQGPPQG YPPYAQGGAQ PYPQPYGQGP 60
61 PPGGYAPQPG FIQPPPSAGG YGAYDDPESQ PKNFSFDDQS IRRGFIRKVY LILMGQLIVT 120
121 FGAVALFVY
|
| Detection Method: |  |
| Confidence: | 5.522879 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [130-316] |
1 11 21 31 41 51
| | | | | |
1 HEGTKTFARN NMWLFWVALG VMLVTMLSMA CCESVRRQTP TNFIFLGLFT AAQSFLMGVS 60
61 ATKYAPKEVL MAVGITAAVC LALTIFALQT KYDFTMMGGI LIACMVVFLI FGIVAIFVKG 120
121 KIITLVYASI GALLFSVYLI YDTQLMMGGE HKYSISPEEY IFAALNLYLD IINIFMYILT 180
181 IIGASRD
|
| Detection Method: | |
| Confidence: | 13.161151 |
| Match: | PF01027.11 |
| Description: | No description for PF01027.11 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
