Protein: | Sin3A-PA, FBpp02... |
Organism: | Drosophila melanogaster |
Length: | 1776 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Sin3A-PA, FBpp02....
Description | E-value | Query Range |
Subject Range |
|
1293.0 | [0..1] | [1776..1] |
Region A: Residues: [1-916] |
1 11 21 31 41 51 | | | | | | 1 MMKRTRVDEV QFGTRPVPQT SGGVGVGVVG VTGGGPTSGG GGTATVGVNT TGVTIGTVVP 60 61 SAHNATISGI GSIHHRILTP QHGGAQTIAY LPSTTPTATN LKTTTSIVDS TTAGGPVGAG 120 121 AQVAVGVGSA AGGGGVVVST GSTGTQTLQY TTSYSVASIQ AGGTLKANTA DGANTVQIHV 180 181 TGGGAANNPA SAQTVSSSSQ TGTIRQRTIS GTQTVATAVG NLATISQQQP VQQSPLGKAQ 240 241 TPPSSVVANS IPVGGTTPPQ GQSGNATPRL KVEDALSYLD QVKYQYADQP QIYNNFLDIM 300 301 KEFKSHCIDT PGVIERVSTL FKGHTELIYG FNMFLPPGYK IEIHSDALGC SVPVVSMPSP 360 361 PGAPTSTGTV HMLTGNSSMS GAGHIAIKTT NAATLTPAAG AGAAAAAAAV AQIQSAGAVN 420 421 LMTHGGASLT QTTIHALQQA TPPQSQSPGG GHVHVSVTNS TAANAVVPGQ PGISVSAHNV 480 481 PQNYSRDRER ATITPTGQVA GAAANVNASA SIVVGGPPTP NSLSELSPHG GAGGGPGAGA 540 541 AQHNLHHIQQ AHQSILLGET GQQNQPVEFN HAITYVNKIK NRFQNQPAKY KKFLEILHDY 600 601 QREQKVMKEG SLNQGKMLTE QEVYTQVAKL FGQDEDLLRE FGQFLPDATN HQSGQYMSKS 660 661 ASVHNDHGKR PTATLSGGAH ITMSSASPAP SGSPLHLGAT TLPQIDKSAH AAAIGNLSAV 720 721 NTSVSIKTYN NNQQQQNHVI GSGLNATRND ILFEKDYHAG LQQQAHQRGA GVGGHHHLAG 780 781 TAAGANIGRP GVGASVMVSY DKEHRNNHHV QKYVGHAPNQ NLTHGHNAKK SPSYGIPSVI 840 841 GSMPHISDNS LDRSSPGISY ATPPLPSGPH GQHNSGSATR RPGDDSLVGH YASGAPPAKR 900 901 PKPYCRDVSF SEASSK |
Detection Method: | |
Confidence: | 101.0 |
Match: | 1y0fB |
Description: | No description for 1y0fB was found. |
Region A: Residues: [917-987] |
1 11 21 31 41 51 | | | | | | 1 CTISDAAFFD KVRKALRSPE VYDNFLRCLT LFNQEIVSKT ELLGLVSPFL MKFPDLLRWF 60 61 TDFLGPPSGQ P |
Detection Method: | |
Confidence: | 2.11 |
Match: | 2cr7A |
Description: | Solution structure of the first PAH domain of the mouse transcriptional repressor SIN3B |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [988-1142] |
1 11 21 31 41 51 | | | | | | 1 AGGLIDGMPL AATQRQGGGS SNSSHDRGTS HQSAAEYVQD VDLSSCKRLG ASYCALPQST 60 61 VPKKCSGRTA LCREVLNDKW VSFPTWASED STFVTSRKTQ FEETIYRTED ERFELDLVIE 120 121 VNSATIRVLE NLQKKMSRMS TEELSKFHLD DHLGG |
Detection Method: | |
Confidence: | 64.376751 |
Match: | PF08295.3 |
Description: | No description for PF08295.3 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [1143-1366] |
1 11 21 31 41 51 | | | | | | 1 TSQTIHQRAI HRIYGDKSGE IITGMKKNPF VAVPIVLKRL KVKEEEWREA QKTFNKQWRE 60 61 QNEKYYLKSL DHQAINFKPN DMKALRSKSL FNEIETLYDE RHDQEDDAME PFGPHLVLPY 120 121 KDKTILDDAA NLLIHHVKRQ TGIQKQEKQK IKQIIRQFVP DLFFAPRQPL SDDERDDAFP 180 181 FLVDDNTKMD VDSPLGRTES STRNAKSTPS ESASPARSNA STSS |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [1367-1491] |
1 11 21 31 41 51 | | | | | | 1 VTPAGIKKET DDSKATTGSF APASSATASS ATPVDDATPS TSSAAAAASA ASSSTVSGTE 60 61 GKPKDDPLSS HKEEGAGSTS SGVATSPRQA QDTAGAGVDV EIKLEHPADF SNPKLLPPHA 120 121 HGQRE |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [1492-1776] |
1 11 21 31 41 51 | | | | | | 1 DESYTLFFAN NNWYLFLRLH AILCDRLHVM YERARLLAIE EERCRVNRRE STATALRLKP 60 61 KPEIQVEDYY PTFLDMLKNV LDGNMDSNTF EDTMREMFGI YAYISFTLDK VVSNAVRQLQ 120 121 YCVTERAALD CVELFATEQR RGCTGGFCRD AHKTFDREMS YQRKAESILN EENCFKVYIY 180 181 KIDCRVTIEL LDSEPEEVDK PAALKAQKFS KYVERLANPA LGGGGNTGRS DSALGNDSVV 240 241 DGSDIKTEAD EDTAEHTQSQ QWTLLESENE KYIWSSPLKI HVQSY |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.