| Protein: | Sin3A-PA, FBpp02... |
| Organism: | Drosophila melanogaster |
| Length: | 1776 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Sin3A-PA, FBpp02....
| Description | E-value | Query Range |
Subject Range |
|
|
1293.0 | [0..1] | [1776..1] |
|
Region A: Residues: [1-916] |
1 11 21 31 41 51
| | | | | |
1 MMKRTRVDEV QFGTRPVPQT SGGVGVGVVG VTGGGPTSGG GGTATVGVNT TGVTIGTVVP 60
61 SAHNATISGI GSIHHRILTP QHGGAQTIAY LPSTTPTATN LKTTTSIVDS TTAGGPVGAG 120
121 AQVAVGVGSA AGGGGVVVST GSTGTQTLQY TTSYSVASIQ AGGTLKANTA DGANTVQIHV 180
181 TGGGAANNPA SAQTVSSSSQ TGTIRQRTIS GTQTVATAVG NLATISQQQP VQQSPLGKAQ 240
241 TPPSSVVANS IPVGGTTPPQ GQSGNATPRL KVEDALSYLD QVKYQYADQP QIYNNFLDIM 300
301 KEFKSHCIDT PGVIERVSTL FKGHTELIYG FNMFLPPGYK IEIHSDALGC SVPVVSMPSP 360
361 PGAPTSTGTV HMLTGNSSMS GAGHIAIKTT NAATLTPAAG AGAAAAAAAV AQIQSAGAVN 420
421 LMTHGGASLT QTTIHALQQA TPPQSQSPGG GHVHVSVTNS TAANAVVPGQ PGISVSAHNV 480
481 PQNYSRDRER ATITPTGQVA GAAANVNASA SIVVGGPPTP NSLSELSPHG GAGGGPGAGA 540
541 AQHNLHHIQQ AHQSILLGET GQQNQPVEFN HAITYVNKIK NRFQNQPAKY KKFLEILHDY 600
601 QREQKVMKEG SLNQGKMLTE QEVYTQVAKL FGQDEDLLRE FGQFLPDATN HQSGQYMSKS 660
661 ASVHNDHGKR PTATLSGGAH ITMSSASPAP SGSPLHLGAT TLPQIDKSAH AAAIGNLSAV 720
721 NTSVSIKTYN NNQQQQNHVI GSGLNATRND ILFEKDYHAG LQQQAHQRGA GVGGHHHLAG 780
781 TAAGANIGRP GVGASVMVSY DKEHRNNHHV QKYVGHAPNQ NLTHGHNAKK SPSYGIPSVI 840
841 GSMPHISDNS LDRSSPGISY ATPPLPSGPH GQHNSGSATR RPGDDSLVGH YASGAPPAKR 900
901 PKPYCRDVSF SEASSK
|
| Detection Method: |  |
| Confidence: | 101.0 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
|
Region A: Residues: [917-987] |
1 11 21 31 41 51
| | | | | |
1 CTISDAAFFD KVRKALRSPE VYDNFLRCLT LFNQEIVSKT ELLGLVSPFL MKFPDLLRWF 60
61 TDFLGPPSGQ P
|
| Detection Method: | |
| Confidence: | 2.11 |
| Match: | 2cr7A |
| Description: | Solution structure of the first PAH domain of the mouse transcriptional repressor SIN3B |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [988-1142] |
1 11 21 31 41 51
| | | | | |
1 AGGLIDGMPL AATQRQGGGS SNSSHDRGTS HQSAAEYVQD VDLSSCKRLG ASYCALPQST 60
61 VPKKCSGRTA LCREVLNDKW VSFPTWASED STFVTSRKTQ FEETIYRTED ERFELDLVIE 120
121 VNSATIRVLE NLQKKMSRMS TEELSKFHLD DHLGG
|
| Detection Method: | |
| Confidence: | 64.376751 |
| Match: | PF08295.3 |
| Description: | No description for PF08295.3 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1143-1366] |
1 11 21 31 41 51
| | | | | |
1 TSQTIHQRAI HRIYGDKSGE IITGMKKNPF VAVPIVLKRL KVKEEEWREA QKTFNKQWRE 60
61 QNEKYYLKSL DHQAINFKPN DMKALRSKSL FNEIETLYDE RHDQEDDAME PFGPHLVLPY 120
121 KDKTILDDAA NLLIHHVKRQ TGIQKQEKQK IKQIIRQFVP DLFFAPRQPL SDDERDDAFP 180
181 FLVDDNTKMD VDSPLGRTES STRNAKSTPS ESASPARSNA STSS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1367-1491] |
1 11 21 31 41 51
| | | | | |
1 VTPAGIKKET DDSKATTGSF APASSATASS ATPVDDATPS TSSAAAAASA ASSSTVSGTE 60
61 GKPKDDPLSS HKEEGAGSTS SGVATSPRQA QDTAGAGVDV EIKLEHPADF SNPKLLPPHA 120
121 HGQRE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1492-1776] |
1 11 21 31 41 51
| | | | | |
1 DESYTLFFAN NNWYLFLRLH AILCDRLHVM YERARLLAIE EERCRVNRRE STATALRLKP 60
61 KPEIQVEDYY PTFLDMLKNV LDGNMDSNTF EDTMREMFGI YAYISFTLDK VVSNAVRQLQ 120
121 YCVTERAALD CVELFATEQR RGCTGGFCRD AHKTFDREMS YQRKAESILN EENCFKVYIY 180
181 KIDCRVTIEL LDSEPEEVDK PAALKAQKFS KYVERLANPA LGGGGNTGRS DSALGNDSVV 240
241 DGSDIKTEAD EDTAEHTQSQ QWTLLESENE KYIWSSPLKI HVQSY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
