YRC Public Data Repository - Protein Structure Prediction

Protein:	stil-PA
Organism:	Drosophila melanogaster
Length:	321 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for stil-PA.

Description	E-value	Query Range	Subject Range
gi\|1780798, gi\|1... - gi\|1780798\|emb\|CAA71320.1\| STAND STILL [Drosophila melanogaster], gi\|1780796\|emb\|CAA71319.1\| STAND S...	606.0	[0..1]	[321..1]

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Predicted Domain #1

Region A:
Residues: [1-201]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVNLDGSEE KMELKKHVPY ILNGELYRIE KQVGDNVTVK CCYCPPDRIY RGSVRSTGNF  60
   61 HMHIKRRHSS LLGKLHEMKV AALEERRDRI MKNRRFAKSR KKAPVAVAAT STAAQSDSGV 120
  121 FVDMQAAVPS GNESHELKIK TVFQRHKQEQ EGATRKLEDS TSDKANLPNI PKNLGIVVQN 180
  181 VSNISVETLP GGSTPASVSF L

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [202-321]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GRPVKPEQGS GPSFLADQPA AIDLSQVPPV QGESKSSGSL ASSMEDVSME YSRSQALSQS  60
   61 LSMAHFLEHP QRDVLQRLER SMAQISQELH CRNRIEHNRM LLEAAKFKFL NPNFQFEPNL 120
  121