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View Structure Prediction Details

Protein: FBpp0308698, fdl-PC
Organism: Drosophila melanogaster
Length: 660 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0308698, fdl-PC.

Description E-value Query
Range
Subject
Range
fdl-PB - The gene fused lobes is referred to in FlyBase by the symbol Dmel\fdl (CG8824, FBgn0045063). It is a...
723.0 [0..1] [660..14]

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Predicted Domain #1
Region A:
Residues: [1-79]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLAVSLRRA LLVLLTGAIF ILTVLYWNQG VTKAQAYNEA LERPHSHHDA SGFPIPVEKS  60
   61 WTYKCENDRC MRVGHHGKS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [80-660]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AKRVSFISCS MTCGDVNIWP HPTQKFLLSS QTHSFSVEDV QLHVDTAHRE VRKQLQLAFD  60
   61 WFLKDLRLIQ RLDYVGSSSE PTVSESSSKS RHHADLEPAA TLFGATFGVK KAGDLTSVQV 120
  121 KISVLKSGDL NFSLDNDETY QLSTQTEGHR LQVEIIANSY FGARHGLSTL QQLIWFDDED 180
  181 HLLHTYANSK VKDAPKFRYR GLMLDTSRHF FSVESIKRTI VGMGLAKMNR FHWHLTDAQS 240
  241 FPYISRYYPE LAVHGAYSES ETYSEQDVRE VAEFAKIYGV QVIPEIDAPA HAGNGWDWGP 300
  301 KRGMGELAMC INQQPWSFYC GEPPCGQLNP KNNYTYLILQ RIYEELLQHT GPTDFFHLGG 360
  361 DEVNLDCWAQ YFNDTDLRGL WCDFMLQAMA RLKLANNGVA PKHVAVWSSA LTNTKCLPNS 420
  421 QFTVQVWGGS TWQENYDLLD NGYNVIFSHV DAWYLDCGFG SWRATGDAAC APYRTWQNVY 480
  481 KHRPWERMRL DKKRKKQVLG GEVCMWTEQV DENQLDNRLW PRTAALAERL WTDPSDDHDM 540
  541 DIVPPDVFRR ISLFRNRLVE LGIRAEALFP KYCAQNPGEC I

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 131.0
Match: 1o7aA
Description: Human beta-Hexosaminidase B
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle