YRC Public Data Repository - Protein Structure Prediction

Protein:	Cpr49Ag-PA
Organism:	Drosophila melanogaster
Length:	134 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Cpr49Ag-PA.

Description	E-value	Query Range	Subject Range
gi\|125808746, gi... - gi\|54636029\|gb\|EAL25432.1\| GA21129-PA [Drosophila pseudoobscura], gi\|125808746\|ref\|XP_001360857.1\| G...	147.0	[0..1]	[134..1]
gi\|119114027, gi... - gi\|119114027\|ref\|XP_318997.3\| ENSANGP00000014755 [Anopheles gambiae str. PEST], gi\|116118219\|gb\|EAA1...	123.0	[0..34]	[133..121]
gi\|157135326, gi... - gi\|157135326\|ref\|XP_001656603.1\| Pupal cuticle protein, putative [Aedes aegypti], gi\|108881232\|gb\|EA...	123.0	[0..5]	[133..3]
gi\|91079648 - gi\|91079648\|ref\|XP_968350.1\| PREDICTED: similar to Cuticular protein 47Ef CG13214-PA [Tribolium cast...	120.0	[0..37]	[133..78]
Cpr49Ae-PA - The gene Cuticular protein 49Ae is referred to in FlyBase by the symbol Dmel\Cpr49Ae (CG8505, FBgn00... gi\|220954344, gi... - gi\|220954344\|gb\|ACL89715.1\| Cpr49Ae-PA [synthetic construct], gi\|220944388\|gb\|ACL84737.1\| Cpr49Ae-PA... gi\|194125516, gi... - gi\|195333744\|ref\|XP_002033546.1\| GM21380 [Drosophila sechellia], gi\|194125516\|gb\|EDW47559.1\| GM21380... gi\|195582725, gi... - gi\|195582725\|ref\|XP_002081176.1\| GD10877 [Drosophila simulans], gi\|194193185\|gb\|EDX06761.1\| GD10877 ...	119.0	[0..1]	[129..1]

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Predicted Domain #1

Region A:
Residues: [1-134]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYKLVFLVCS ALLLSYVLAR PQDQRAGATS AATTTTAATI VKQDNVNNAD GSFNSSYETS  60
   61 NGIRVENIGY LKKIIVPKTE TSDGQVIDEH EELVLVQTGS YSYSDPDGNL ITLRYVADEN 120
  121 GFQPEGDHLP VAPQ

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	21.769551
Match:	PF00379.14
Description:	No description for PF00379.14 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits