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View Structure Prediction Details

Protein: Cpr49Ac-PA
Organism: Drosophila melanogaster
Length: 294 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Cpr49Ac-PA.

Description E-value Query
Range
Subject
Range
Cpr49Ac-PC - The gene Cuticular protein 49Ac is referred to in FlyBase by the symbol Dmel\Cpr49Ac (CG8502, FBgn00...
gi|220950620 - gi|220950620|gb|ACL87853.1| Cpr49Ac-PC [synthetic construct]
181.0 [0..1] [294..1]

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Predicted Domain #1
Region A:
Residues: [1-125]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTKSMLSFS LVVALFVVCH ASPVPDNNGR SGSQESIGRY HHMPIPYRHV SDQRELGKYH  60
   61 HIPYPYDGGY GPYAGSNIPY VHDDRPYNHD LYTSTTTKKP TTTTKRTTTS TTTTTTTPRN 120
  121 ILFNY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [126-227]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDEGRHKILH KEEVRKQDKY DHSYLTENGI YGEEQAKLHH TGGTHAKGFY EYTGDDGKLY  60
   61 RVNYASNDGG FMPQGDHIHP IPDAIVRALK YVEEQHKING GA

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 6.920819
Match: PF00379.14
Description: No description for PF00379.14 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [228-294]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QFDHRGFRIN HMTKDLKAQI KAIHLEEMPK ELTEQIHMLE HEVELAEEEE REEQAALERL  60
   61 RQAAKSH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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