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View Structure Prediction Details

Protein: CG30043-PA
Organism: Drosophila melanogaster
Length: 878 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG30043-PA.

Description E-value Query
Range
Subject
Range
gi|54636020, gi|... - gi|54636020|gb|EAL25423.1| GA15600-PA [Drosophila pseudoobscura], gi|125808720|ref|XP_001360848.1| G...
717.0 [0..6] [878..1]

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Predicted Domain #1
Region A:
Residues: [1-121]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEKTDKENP IDTELVESLS LRKGYVRRPR LSWYYAPSFL LLWLALFYAI VIPLYYRLPD  60
   61 RLTISEESHR PGEFVAERAQ QYLYTYDRIG PKVTGSYANE VTTVEFLVNE TEKIRAEMRS 120
  121 D

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.69897
Match: 1rtqA
Description: The 0.95 Angstrom Resolution Crystal Structure of the Aminopeptidase from Aeromonas proteolytica
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [122-433]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LYDLELDVQS PTGGYVFNDM VNMYQGIHNV IVKLSSKSSQ SESYLLLNSH FDSKPGSPGS  60
   61 GDDGTMVVVM MEVLRQMSIS EIPFEHPIVF LFNGAEENPL QASHGFITQH KWAEKCKAFI 120
  121 NLEVGGSGGR DLLFQSGPNN PWLMKYYRQH AKHPFATTMA EEIFQSGVLP SDSDFRIFRD 180
  181 YGNIAGLDIA QIENGYVYHT AFDTYENVPG RSIQNSGNNV LALVRAYSNA SELYNTESDD 240
  241 SHAVFFDFLG LFFVYYTETT GIVVNCVIGV LSLVLVGCSV WRMCHQSEEA SLPQISIWFL 300
  301 SILGLHVVGF LL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.69897
Match: 2ootA
Description: No description for 2ootA was found.

Predicted functions:

Term Confidence Notes
binding 0.462692332456305 bayes_pls_golite062009
hydrolase activity 0.135975510640014 bayes_pls_golite062009
protein binding 0.0314733407355351 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [434-637]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CICLPLLMAV LFDAGDRSLT YFTSNWLVFG LYVCPAIIGL VLPLTLYYTL LPNEKLSQAY  60
   61 QLQLSLHAHL VVQALLALIL TAMGLRSQYL CLISMIFYGG ALLINLVSTL HDRGYYWVPI 120
  121 VMFLQVLPFS YFCYLFYMFL VIFIPVLGRN GYSTNPDLIV GLLCGVCVFF ALGFAAQLIN 180
  181 MFRWPKLILL GLGVMTFIFC MIAV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [638-698]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDVGFPYRAK TNVMRANCLH TRRIFYEHDG SVSRSDSGYY FNYQDRRAFA PLEDSALDLT  60
   61 G

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [699-878]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LEPVANRCDD YVMCGIPCFY YSWCKWRQWD GWLPRESEVI LPGELTLDFL GYTVLESGTV  60
   61 ARYEFELAGP PHMNLFIQPV GSAKVDDWSF VRKMLDEPEE FQPPYQIFHS YGTDNTSLKF 120
  121 FIDMEKPDGI FDTPTLELAA VGHWVSFEYE RDAEAKDFVA AFPDFVHVME WPSIFKRYIF 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle