| Protein: | CG8858-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1890 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8858-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
1008.0 | [0..1] | [1890..3] |
|
Region A: Residues: [1-203] |
1 11 21 31 41 51
| | | | | |
1 METGPNAEIE LLERVLLRLG NADSDEKLEA AVGKFLTPVI LKMNSPHNVV RTKVVEVLTH 60
61 IKRRLSSRGH VQIPVEALLD QYAAQDSSTF LKNFAIIFIT MGFPRLALEQ QTALASKVVG 120
121 CEDKLESYQD KLFALLLPVL SDMKIPDDPT QRSKLLDLQD KPAICANFLA LLQDVLLLPY 180
181 GITQEQDVPP GLSPYSFTRI IAY
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [204-325] |
1 11 21 31 41 51
| | | | | |
1 NWRAEELEKV KKGIVRFLCA SVFSDLQIFV PLVVASADTR FSVATPAITE LSKLCTMLDF 60
61 SNPAVTAPLY TLFAGNQSKI TDRQTRPCCA RVRQKLLQYL IKCRGKSINV TKGLQVTFDG 120
121 FF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [326-701] |
1 11 21 31 41 51
| | | | | |
1 GTNTNQKCKV LALQFMELLL RDGPRELVSK VSKVILTGIT KIIGRDSNEP NDVQNAAYSA 60
61 LAQHARSFPQ DVSQDLKLVL GYFNNLASCA PELHSSIREA LVSMAPAFAW KTKEKSDAME 120
121 VDKNVDSSSV KLDGQQHLLL AMLLDNAESK VQIVQNVTSV FLTSCYPEYY APARYLLLLI 180
181 AGERNSLREN VTTYLYGTSK KDHINYSMLS SIDHSKNRIS SESISDFNHL SLEQRRVMLP 240
241 SFQVMMSHVH EMAEKRLKKN TACVVVGRTK LPYSLEVYEE LLDYLRLCLW YSAGVVAAPG 300
301 DEKYTHELRE YITLHYEDTE DNALHQYAQF VQRSVEAKRS ESNLICLYDL LNAAPELFAA 360
361 KQLHLLEPLG NTLKDV
|
| Detection Method: | |
| Confidence: | 3.154902 |
| Match: | 1w63A |
| Description: | AP1 clathrin adaptor core |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [702-1598] |
1 11 21 31 41 51
| | | | | |
1 SETMRINVAQ VYGILWAFGL SDEKFDEEVG ECLNSLTQKT LEHKHGWLLV VGHTFNRKIA 60
61 MLKQENKTKD FAAWPQFVNA VKIISKCLCE SQWLLVSAAV KCISMIGKAV EIPNVPVEIQ 120
121 VPSKDGDDDD EEMTEYTSID SSTKLVIFGV VFQLLRSSSA RQKIREDSAR CLGYLAIGDG 180
181 EHFTKRNLDK FLTLTKIQKD AALNIAISEA IVNTLCGYDV NKGQPDEKFV NKHCNDDDFD 240
241 QFLNSLIRLV TDPNPHSRQA ISVWLLAVVK HCSQRPAVLA KKELLQFAFT ELLSDDSEFV 300
301 QDVASRGLGL VYSISDSGSQ SDLANSLLDQ LIGGKRKVNQ VTADTELFAE GMLGKTPTGG 360
361 NITTYKELCS LASDLNQPDM IYQFMQLANH NATWTSKLGA AFGLKTLSAE SRQKMEPYLG 420
421 KIIPRLYRYK YDPTPKIQNS MISIWDTIVT DSKEVTERYY WEILRELLDN LTCKEWRVRI 480
481 ACCLAVRDLL NRPNGLKLRS EEPVRRALPD NSMEVDEVPE PELKELWFQL FRVMDDIHEG 540
541 TRVAAHGTAS FLGKLCVIAS SSDHGKSGTA VASSILPFLL ETGVGHKVPE IRRVSIKTIS 600
601 DMIDSSGSLI APHLATLIPC LLRATGELEN TKLSYVSTRL GADNEAQEAV DTLRAEAAKS 660
661 LHTMETIGKC VRYIDYSVLE KMTPEVLELM KGSVNLGTKI GCAHFVCLIS IRLGKEMTPL 720
721 VGKYIRACFV GIKNRNATVR KYNASAIGHL LGLAKEQSIK SLFTKLEELY AEQPGNRSIA 780
781 LTIQSINKRH HELLKDYMDS MLPLIFFAMH EEPNEETKAN VELWKDLWHD VSPGDAGIRL 840
841 NLNVIIPKLE SSLTDASWSR KAQAANAIQT IATRLSSSLD EPDRLRLIKL LLSGLQG
|
| Detection Method: | |
| Confidence: | 86.221849 |
| Match: | 2ot8A |
| Description: | No description for 2ot8A was found. |
|
Region A: Residues: [1599-1890] |
1 11 21 31 41 51
| | | | | |
1 RTFEGKERLL QALAALTKGL DRNHQICSSI IDAAMREARK REPVYRTMAL ASLGEILDQL 60
61 EADRFEEVYN MSWNLLEKKE LRKESDDEDE PNTSQELSAD ERNKRAQTLN RLKEVVWETL 120
121 GKSWPRHSIE TQHRYQLFFA ENCTSILAES TRPVQVSLLA ALTKYIERLH VFDESAQVPD 180
181 LTQINQEKKI KTEETAPKTR EAIVEKICTD VLAAVALAAG VPHSGLKKEA LNIVLMLIKR 240
241 LSGSGNGNQQ PLRLIKQSFE SNLEKFQRDS APEIRCRIKD IEDKLSKLNP QN
|
| Detection Method: | |
| Confidence: | 54.09691 |
| Match: | 2ie3A |
| Description: | No description for 2ie3A was found. |
