| Protein: | Prp8-PA |
| Organism: | Drosophila melanogaster |
| Length: | 2396 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Prp8-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
4674.0 | [0..60] | [2396..1] |
|
Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MSIPPYMIPQ NAWAAQLMAQ QAYAAAHAQQ AQLHAQQQMA NQIQQIPPPG APLPPAGGHT 60
61 NGIPIPVGGQ GPGLGQIPTP KPDILTEEKL QEKALKWQHL QSKRFAEKRK FG
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [113-273] |
1 11 21 31 41 51
| | | | | |
1 FVDTQKEDMP PEHIRKIIRD HGDMTSRKYR HDKRVYLGAL KYMPHAVLKL LENMPMPWEQ 60
61 IRDVQVLYHI TGAITFVNEI PWVIEPVYIA QWGTMWIMMR REKRDRRHFK RMRFPPFDDE 120
121 EPPLDYADNV LDVEPLEAIQ IELDNDEDNA VYKWFYDHRP L
|
| Detection Method: | |
| Confidence: | 123.346787 |
| Match: | PF08082.2 |
| Description: | No description for PF08082.2 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [274-346] |
1 11 21 31 41 51
| | | | | |
1 VDTQFVNGTT YRKWNLSLPQ LATLYRLANQ LLTDLVDNNF FYLFDPKSFF TAKALNMAIP 60
61 GGPKFEPLIK DHN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [347-525] |
1 11 21 31 41 51
| | | | | |
1 VGDEDWNEFN DINKVIIRQP IRTEYRIAFP YLYNNMPHFV HLSWYHTPNV VYIKTEDPDL 60
61 PAFYFDPLIN PISHRNANSK IQEPLPDDDE DFTLPDDVQP FLQDTPLYTD NTANGIALLW 120
121 APRPFNMRSG RSRRAIDVPL VKCWYKEHCP PGHPVKVRVS YQKLLKYYVL NALKHRKPK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [526-593] |
1 11 21 31 41 51
| | | | | |
1 PQKKRYLFRS FKATKFFQTT TLDWVEAGLQ VCRQGYNMLN LLIHRKNLNY LHLDYNFNLK 60
61 PVKTLTTK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [594-684] |
1 11 21 31 41 51
| | | | | |
1 ERKKSRFGNA FHLCREILRL TKLIIDSHVQ YRLNNVDAFQ LADGLQYIFA HVGQLTGMYR 60
61 YKYKLMRQIR MCKDLKHLIY YRFNTGPVGK G
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [685-787] |
1 11 21 31 41 51
| | | | | |
1 PGCGFWAPGW RVWLFFMRGI TPLLERWLGN LLSRQFEGRH SKGVAKTVTK QRVESHFDLE 60
61 LRASVMHDIV DMMPEGIKQN KARTILQHLS EAWRCWKANI PWK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [788-890] |
1 11 21 31 41 51
| | | | | |
1 VPGLPIPIEN MILRYVKMKA DWWTNTAHYN RERIRRGATV DKTVCKKNLG RLTRLYLKAE 60
61 QERQHNYLKD GPYISPEEAV AIYTTTVHWL ESRRFAPIPF PPL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [891-1067] |
1 11 21 31 41 51
| | | | | |
1 SYKHDTKLLI LALERLKEAY SVKSRLNQSQ REELGLIEQA YDNPHEALSR IKRHLLTQRA 60
61 FKEVGIEFMD LYSHLIPVYE VEPLEKITDA YLDQYLWYEA DKRRLFPPWI KPSDTEPPPL 120
121 LAYKWCQGIN NLQDVWDVGE GECNVLLESR FEKLYEKIDL TLLNRLLRLI VDHNIAD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1068-1204] |
1 11 21 31 41 51
| | | | | |
1 YMTAKNNVVI NYKDMNHTNS YGIIRGLQFS SFITQYYGLV LDLLVLGLHR SSEMAGPPQM 60
61 PNDFLTFQDT VTETAHPIRL YCRYVDRIHL FFRFSAEEAR DLIQRYLTEH PDPNNENIVG 120
121 YNNKKCWPRD ARMRLMK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1205-1318] |
1 11 21 31 41 51
| | | | | |
1 HDVNLGRAVF WDIKNRLPRS VTTIGWESTF VSVYSKDNPN LLFNMSGFEC RILPKCRTQN 60
61 EEFTHRDGVW NLQNEITKER TAQCFLRVDD ESLGRFHNRV RQILMASGST TFTK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1319-1507] |
1 11 21 31 41 51
| | | | | |
1 IVNKWNTALI GLMTYFREAV VNTQELLDLL VKCENKIQTR IKIGLNSKMP SRFPPVVFYT 60
61 PKELGGLGML SMGHVLIPQS DLRWSKQTDV GITHFRSGMS HDEDQLIPNL YRYIQPWESE 120
121 FIDSQRVWAE YALKRQEANA QNRRLTLEDL EDSWDRGIPR INTLFQKDRH TLAYDKGWRI 180
181 RTEFKQYQV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1508-1567] |
1 11 21 31 41 51
| | | | | |
1 LKQNPFWWTH QRHDGKLWNL NNYRTDMIQA LGGVEGILEH TLFKGTYFPT WEGLFWEKAS 60
61
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1568-1796] |
1 11 21 31 41 51
| | | | | |
1 GFEESMKYKK LTNAQRSGLN QIPNRRFTLW WSPTINRANV YVGFQVQLDL TGIFMHGKIP 60
61 TLKISLIQIF RAHLWQKIHE SIVMDLCQVF DQELDALEIE TVQKETIHPR KSYKMNSSCA 120
121 DILLFPAYKW NVSRPSLLAD TKDTMDNTTT QKYWLDIQLR WGDYDSHDVE RYARAKFLDY 180
181 TTDNMSIYPS PTGVLIAIDL AYNLHSAYGN WFPGCKTLIQ QAMAKIMKA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1797-1986] |
1 11 21 31 41 51
| | | | | |
1 NPALYVLRER IRKALQLYSS EPTEPYLSSQ NYGELFSNQI IWFVDDTNVY RVTIHKTFEG 60
61 NLTTKPINGA IFIFNPRTGQ LFLKIIHTSV WAGQKRLGQL AKWKTAEEVA ALIRSLPVEE 120
121 QPKQIIVTRK GMLDPLEVHL LDFPNIVIKG SELQLPFQAC LKVEKFGDLI LKATEPQMVL 180
181 FNLYDDWLKT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1987-2055] |
1 11 21 31 41 51
| | | | | |
1 ISSYTAFSRL ILILRALHVN TERTKIILKP DKTTITEAHH IWPTLTDEEW IKVEVQLKDL 60
61 ILADYGKKN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [2056-2098] |
1 11 21 31 41 51
| | | | | |
1 NVNVASLTQS EIRDIILGME ISAPSAQRQQ IAEIEKQTKE QNQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [2099-2396] |
1 11 21 31 41 51
| | | | | |
1 LTATTTRTTN KHGDEIITST TSNYETQTFS SKTEWRVRAI SATNLHLRTN HIYVSSDDIK 60
61 ETGYTYILPK NILKKFVTIS DLRAQIAGYL YGVSPPDNPQ VKEIRCIVMP PQWGTHQTIN 120
121 LPNTLPTHQY LKDMEPLGWI HTQPNELPQL SPQDITTHAK IMQENSNWDG EKTIVITCSF 180
181 TPGSCSLTAY KLTPSGFEWG SKNTDKGNNP KGYLPSHYER VQMLLSNKFL GFFMVPAQSS 240
241 WNYNFMGVRH DPNMKYELQL ANPKEFYHEL HRTSHFLLFS NLEDGGDGAG ADREDVYA
|
| Detection Method: | |
| Confidence: | 112.0 |
| Match: | 2p87A |
| Description: | No description for 2p87A was found. |
