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View Structure Prediction Details

Protein: CG13178-PA
Organism: Drosophila melanogaster
Length: 302 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG13178-PA.

Description E-value Query
Range
Subject
Range
gi|54636773, gi|... - gi|54636773|gb|EAL26176.1| GA12098-PA [Drosophila pseudoobscura], gi|125810727|ref|XP_001361597.1| G...
432.0 [0..1] [301..1]

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Predicted Domain #1
Region A:
Residues: [1-189]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYVIDQRLK AQQIAQDKSV QVIHDVTSVL LEPKFIDSLL NGSKHNSAQL LTAEHCKFML  60
   61 NDIATCSLMR LDEQSMSKLW NLMTMVYKWQ LFVSRHQHHL LEITFRHLEA INRLYPDAKR 120
  121 HMLIDFTKNT LLDFWNASGE DAQLSIYQTN RAWLQCFNTK ISLLIRMGFQ AMDGSFIRDV 180
  181 DQDYYAEYV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [190-302]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESAGDNIYAK SADQRERQQR EPNSMDQLAA QLNINPAQSE DLQPINARQF QQQFEQAFGN  60
   61 VLFNDTAASS SGCEFVQLQP TTSASSSEKV ATSMSRGGSL LNQNLLDLYS KMP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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