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View Structure Prediction Details

Protein: CG8888-PA
Organism: Drosophila melanogaster
Length: 388 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8888-PA.

Description E-value Query
Range
Subject
Range
gi|146296617, gi... - gi|82501013|ref|ZP_00886394.1| 3-oxoacyl-(acyl-carrier-protein) reductase [Caldicellulosiruptor sacc...
283.0 [0..90] [344..1]

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Predicted Domain #1
Region A:
Residues: [1-90]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVFDNNMRR ASRRASLRRG SISALPQKSH EIPWDIFERL FMPFLFCQAA AIVTSHLLHA  60
   61 LDISSISTFA VFVWFALATV GAVLFYHFVK 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.39794
Match: 2z5lA
Description: No description for 2z5lA was found.

Predicted Domain #2
Region A:
Residues: [91-388]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSASGKGVLI TGCEAPLAWY LAKKLDDLGF TVYAGFNTPI EESDEAKILK EVTSGRMKLL  60
   61 HLDVTSEKTI LEAARYVSQH LPHGAEGLWS VVHCAHWIAL GELEWIPFAV LRKSLDLNLL 120
  121 GSARLTQIFL PLVRRAHGRV VFLTSGLNRV PSPVRGIQCA TQAAVDCFAA CLRQEMRTRG 180
  181 VDVSVVAAGE FAPGNGWLNE TELRDQAKQM WNQLSSEQKK TYGEDYYEAA MTSVEKYSRQ 240
  241 AADIQPTLRV LIDAVTRTFP MARYTPVTSS ERLQIFLAEH LAPSLYESLY GEQKKFVY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.522879
Match: 2p68A
Description: No description for 2p68A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle