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View Structure Prediction Details

Protein: Drep-1-PA
Organism: Drosophila melanogaster
Length: 297 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Drep-1-PA.

Description E-value Query
Range
Subject
Range
gi|3114590 - gi|3114590|gb|AAC34984.1| DNA fragmentation factor DREP-1 [Drosophila melanogaster]
386.0 [0..1] [297..1]
gi|125808945, gi... - gi|54636102|gb|EAL25505.1| GA21015 [Drosophila pseudoobscura pseudoobscura], gi|125808945|ref|XP_001...
gi|125808945|ref... - GA21015-PA [Drosophila pseudoobscura], GA21015 [Drosophila pseudoobscura pseudoobscura]
372.0 [0..1] [273..5]
gi|26333135 - gi|26333135|dbj|BAC30285.1| unnamed protein product [Mus musculus]
251.0 [0..3] [250..7]
gi|71896577, gi|... - gi|71896577|ref|NP_446131.2| DNA fragmentation factor, alpha subunit [Rattus norvegicus], gi|7167971...
249.0 [0..3] [221..7]
gi|157107231, gi... - gi|157107231|ref|XP_001649684.1| hypothetical protein AaeL_AAEL014825 [Aedes aegypti], gi|108868709|...
237.0 [0..16] [199..31]

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Predicted Domain #1
Region A:
Residues: [1-99]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METAANSGDS KKPFKVKDVT RNIKKAVCAS SLEEIRSKVA EKFEKCDHLP TIHLDSDGTE  60
   61 IDDEEYFRTL DENTELVAVF PGEHWIDPTH YVTITTPHG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.69897
Match: 2eelA
Description: No description for 2eelA was found.

Predicted Domain #2
Region A:
Residues: [100-297]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NEAGTGNGEL NGGGEGDTTD ANNSESARIR QLVGQLQNNL CNVSVMNDAD LDSLSNMDPN  60
   61 SLVDITGKEF MEQLKDAGRP LCAKRNAEDR LNLLKLLKAG AIFCSERYPE DAEAIDREIG 120
  121 RQLNEAESGQ MSTTTTSNTR TIEVVQCDNQ NTTITITVGE ATTTCATASG AMGSSAAEAA 180
  181 ANEANANPNR NPNANGDI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle