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View Structure Prediction Details

Protein: rho-7-PA, FBpp03...
Organism: Drosophila melanogaster
Length: 351 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rho-7-PA, FBpp03....

Description E-value Query
Range
Subject
Range
PARL_PONPY, PSAR... - (Q5R5H4) Presenilins-associated rhomboid-like protein, mitochondrial precursor (EC 3.4.21.105) (Mito...
PARL_PONAB - Presenilins-associated rhomboid-like protein, mitochondrial OS=Pongo abelii GN=PARL PE=2 SV=1
273.0 [0..15] [351..34]

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Predicted Domain #1
Region A:
Residues: [1-141]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLMSRALCRS WLPQVARRCH ANVNVPILRI NSGHPAARSC RQIHSNRKQS SNLKPTTGEP  60
   61 AAAEQNTPVP VNNVIKAVAF TGAFTVGCFA GATILEYENT RSLILEKARQ ARFGWWQSRS 120
  121 LADRDYWTQI KQDIRRHWDS L

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [142-351]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPGDKMFAPI LLCNLVAFAM WRVPALKSTM ITYFTSNPAA KVVCWPMFLS TFSHYSAMHL  60
   61 FANMYVMHSF ANAAAVSLGK EQFLAVYLSA GVFSSLMSVL YKAATSQAGM SLGASGAIMT 120
  121 LLAYVCTQYP DTQLSILFLP ALTFSAGAGI KVLMGIDFAG VVMGWKFFDH AAHLGGAMFG 180
  181 IFWATYGAQI WAKRIGLLNY YHDLRRTKQK 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.0
Match: 2ic8A
Description: No description for 2ic8A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle