| Protein: | CG8290-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1199 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8290-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
389.0 | [0..528] | [1197..1841] |
|
Region A: Residues: [1-226] |
1 11 21 31 41 51
| | | | | |
1 MSNSAPGSES GLAKVATPSP SPLAKLDADF TSSKFEMHPS LSDEERRFYL KMYPNVDLVN 60
61 QRKVHCTVCK LHLGTAPAAE SNIKMHPILR VTHCVKCHDF YNSGEFSKGE DGSELYCRWC 120
121 GQGGEVYCCS TCPYVFCKSC IVKNLSKGVI VDIEQNENWN CFSCTSKILW PLRAQHWALV 180
181 NYLQTQKRAL QTLQLPEVEA RRQMLKDNSN CCRLAKSKTS SLSDSM
|
| Detection Method: |  |
| Confidence: | 60.522879 |
| Match: | 2jm1A |
| Description: | No description for 2jm1A was found. |
|
Region A: Residues: [227-314] |
1 11 21 31 41 51
| | | | | |
1 ESLESNVSKR SQGSSAGSSK RGSMPKTIPP GPPSKRAKAS NNEVVCTPDL LSMLEPDCQL 60
61 SVTPKPTGRQ TVTAANITTP RIVTVQQN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [315-484] |
1 11 21 31 41 51
| | | | | |
1 YQPGQSSSNS GSNGSVSGSS SVPPTRSSLP PPLVLSGSGI RYRQNAPGGV SGVVRRTVVP 60
61 NSVKTTGPVF HTINGFKVDL NSAAQQDSYR LPNGRLIQVK RQVPQTIQPA STVPTPPTPP 120
121 ALVVPQVGPG VVIRPRAPIT TNRPSLHIST YGSNMGIYNP QTNQQQRAPQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [485-726] |
1 11 21 31 41 51
| | | | | |
1 VRVGNANPAP PPLQGLPPNA NGGQTLMITP APQPAPKVPT LVRLTFPNTP MGQARAQLQE 60
61 QIFSAMDICT HLTGKVVSLT HSNAYNQVRS YLELKELYIH MSYLMTYAIG RFKNLQEKCL 120
121 VDMREKGFKN DANSLENGQL AADKQASDDE DNEIEIVEPK TDTITIDSDN EDDMPSTSTA 180
181 TQQEQPQETA IMKITSVTSE ASKKELQENN QADIDVAAFS STILASLLEV EVNEGASEPK 240
241 PV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [727-893] |
1 11 21 31 41 51
| | | | | |
1 SPGQKKQPRK KTTNKPNPAL LQLERQRMED MKKSDAKLKM KVMVKLKRAE DEFEVARKWV 60
61 EDMKQGQELA TKIKDSKAAT PSNKTQKPSE NLKISEKGSS AKKESTKQHG EGDKENTKNK 120
121 EKIGDILKAA IKAKIGENEK LMAEDVQLPV DELLTEKDKE LDKETLT
|
| Detection Method: | |
| Confidence: | 5.30103 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [894-1199] |
1 11 21 31 41 51
| | | | | |
1 STEPETNKKS GTEKGSDKKQ HLTKENNVKG ESKDESKTDQ KSDCKKGPDS ECTEIEEETE 60
61 MLSEKGYGGS EKEQGDTENM EDETSSERPT LIGEIEKNLL KEGKEESSEK FDKEVEPSKD 120
121 VGKDSPTTQG KGQDSDKLKN ARAGLKNSTQ DASNTVEPPV AASNENDQSS VGELIERMDV 180
181 TELDEKPKEL LDCALDEVIP MEGIELSDDT EDLIKALGSP SVLPSQNTKD NETDLDANDF 240
241 IGNLPLETTE PPEILLKEDE CKVEKTTGIS QVGAPSPAEN GDTEMESTLE ASDSAPDEFA 300
301 TAEIVG
|
| Detection Method: | |
| Confidence: | 14.30103 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
