YRC Public Data Repository - Protein Structure Prediction

Protein:	FBpp0301844, CG8...
Organism:	Drosophila melanogaster
Length:	270 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0301844, CG8....

Description	E-value	Query Range	Subject Range
GINS1, PSMF1 - proteasome (prosome, macropain) inhibitor subunit 1 (PI31), GINS complex subunit 1 (Psf1 homolog)	342.0	[0..15]	[268..3]
PSMF1_PONPY - Proteasome inhibitor PI31 subunit - Pongo pygmaeus (Orangutan) PSMF1_PONAB - Proteasome inhibitor PI31 subunit OS=Pongo abelii GN=PSMF1 PE=2 SV=1	341.0	[0..15]	[268..3]
gi\|114680478, gi... - gi\|114680478\|ref\|XP_001153170.1\| PREDICTED: hypothetical protein isoform 5 [Pan troglodytes], gi\|114...	341.0	[0..15]	[268..3]
PSMF1_RAT - Proteasome inhibitor PI31 subunit OS=Rattus norvegicus GN=Psmf1 PE=1 SV=1	340.0	[0..15]	[268..3]
PSMF1_MOUSE - Proteasome inhibitor PI31 subunit OS=Mus musculus GN=Psmf1 PE=1 SV=1	338.0	[0..15]	[268..3]
gi\|109092554, gi... - gi\|109092556\|ref\|XP_001112759.1\| PREDICTED: proteasome inhibitor subunit 1 isoform 5 [Macaca mulatta...	337.0	[0..15]	[268..3]
gi\|74356497 - gi\|74356497\|gb\|AAI04536.1\| Proteasome (prosome, macropain) inhibitor subunit 1 (PI31) [Bos taurus]	334.0	[0..15]	[268..3]

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Predicted Domain #1

Region A:
Residues: [1-154]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESGSTAKTG DFFYGWDLLY KTVKADVSKK SDLLIALVHF LLTKHYNFRC VGVGDDKTLP  60
   61 EEEGSELLPD SWNDDDTKYS LRYVHDKMLY LLLGHITEGS LLINLLDINT KKVSNICVEP 120
  121 ETLVPEVKGG ITTIMPSASE IVERYRRELL DPVF

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [155-270]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TGNSREVTTQ TTNSPRPIGS DPDPLRIGEP RRGGSFIPSA FEPRPFGFPD VGRGDLDPLG  60
   61 RGGHGNLFSF PSRPNMGPGP VPRFDPFNPL NPNRPGQGGI NPDHMRPPDW NPDYYM

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits