| Protein: | Sobp-PA, FBpp0311728 |
| Organism: | Drosophila melanogaster |
| Length: | 813 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Sobp-PA, FBpp0311728.
| Description | E-value | Query Range |
Subject Range |
|
|
299.0 | [0..37] | [287..1] |
|
Region A: Residues: [1-188] |
1 11 21 31 41 51
| | | | | |
1 MSFLDVRCFG KSIARKLKRA CESRKANFSP ESYIPHPVEM SAKTSPSSTS RDANVGSSSA 60
61 IPVQIKKELP SDEIKEFAHN TMNELLGWYG FEGVDVDRLD LTAKTSRLLQ SAAAAAVANQ 120
121 QSHQLHQLEP HPNLERKRTS LLRSSSRSSL AAAYHNNNNN NNNNNNGSSS KNNGGVGGVG 180
181 VGSGRKSG
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [189-368] |
1 11 21 31 41 51
| | | | | |
1 LMNCSSTTTT PSDHDTRSSR EEDSKSPHSI GKPAGAAHTD EKIDFSNCCW CHRPIAENAP 60
61 DYLTSCDGPR YCSESCFAQS RRASFKKAKT CDWCKHVRHA VSYVDFQDGA SQLQFCSEKC 120
121 LNQYKMQIFC HETQAHLDMH PHLRDQAMDA GSEAGLITPD LWLRNCRSRS ASPASTLSVS 180
181
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [369-668] |
1 11 21 31 41 51
| | | | | |
1 PGPPPAPAVS RCPDSPPSHH PSKPLISVAP VSKLLAQKSP GPGPGAPPPP PPPVQRHLAG 60
61 KLGRRKRRGI SSSLGSETVA SLLQKQQQQQ APQQHQAPPT LTADFGGSSV PLPPLSPMPS 120
121 MQEAPQQQQA PQVPPTQALP RGPTAIPASY FATPSNGVPM GHPFAGRPPP PPHHFMHPPP 180
181 HGMMPRGFGP HFGPPLPPQM PELGSLLGAV PPVTVMVPYP IIIPLPIPIP VPLPVIDFYK 240
241 AHLTPEERKR FDEQRAAPTR AENAEEQEQP QPLDCSKSRS ELEEEKPDVE KLSEPGQELD 300
301
|
| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [669-813] |
1 11 21 31 41 51
| | | | | |
1 NDQEEDEKES IPKTNPDGDT NAASPSISQE SSSSPQQTHC IVRDSTQSEP EADNQKLPKL 60
61 KITRLQTKRT LIQTKEAAAE CSRPLRKRKR IIDCDFQKMG LKEPEMANDG EQSNGSSNKE 120
121 ADADPEAECN MSGSHSNSGS AKAKK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
