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View Structure Prediction Details

Protein: Drip-PB, Drip-PA
Organism: Drosophila melanogaster
Length: 245 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Drip-PB, Drip-PA.

Description E-value Query
Range
Subject
Range
gi|69111664 - gi|69111664|gb|AAZ03394.1| Aqp4-Luc fusion protein [Reporter vector pmuAqp4-Luc]
237.0 [0..21] [245..11]

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Predicted Domain #1
Region A:
Residues: [1-245]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEKTEMSKF VGVADITENK KIWRMLLGEL VGTFFLIFVG VGSTTSGSVP QIAFTFGLTV  60
   61 ATIAQGLGHL SGCHINPAVT LGFLIVGEIS ILKAAFYIIV QCVGAIAGAA VIKVALDGVA 120
  121 GGDLGVSSFD PSLNCAQAVL IEALITFILV FVVKAVSDPG RQDIKGSAPL AVGLAIAAGH 180
  181 LCAIKLSGAS MNPARSFGPA VVQGVWTYHW VYWVGPIAGG LLAGIIYRLI FKVRKGDDET 240
  241 DSYDF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 54.522879
Match: 2d57A
Description: Double layered 2D crystal structure of AQUAPORIN-4 (AQP4M23) at 3.2 a resolution by electron crystallography
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle