YRC Public Data Repository - Protein Structure Prediction

Protein:	san-PA
Organism:	Drosophila melanogaster
Length:	184 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for san-PA.

Description	E-value	Query Range	Subject Range
gi\|54636668, gi\|... - gi\|54636668\|gb\|EAL26071.1\| GA11576-PA [Drosophila pseudoobscura], gi\|125810438\|ref\|XP_001361493.1\| G...	128.0	[0..4]	[184..2]
gi\|34869152, gi\|... - gi\|34869152\|ref\|XP_213624.2\| PREDICTED: similar to Mak3 homolog [Rattus norvegicus], gi\|197245836\|gb...	125.0	[0..1]	[171..1]
gi\|14521872, gi\|... - gi\|5459092\|emb\|CAB50578.1\| N-terminal acetyltransferase [Pyrococcus abyssi GE5], gi\|14521872\|ref\|NP_... gi\|5459092, gi\|7... - pir\|\|D75017 n-terminal acetyltransferase PAB1098 - Pyrococcus abyssi (strain Orsay), gi\|5459092\|emb...	124.0	[0..6]	[158..20]
gi\|20807038 - gi\|20807038\|ref\|NP_622209.1\| Acetyltransferase [Thermoanaerobacter tengcongensis MB4] gi\|20807038, gi\|... - gi\|20807038\|ref\|NP_622209.1\| acetyltransferase [Thermoanaerobacter tengcongensis MB4], gi\|20515525\|g...	124.0	[0..5]	[152..3]
NAA50_MOUSE - N-alpha-acetyltransferase 50 OS=Mus musculus GN=Naa50 PE=1 SV=1	123.0	[0..1]	[171..1]
gi\|47223367 - gi\|47223367\|emb\|CAG04228.1\| unnamed protein product [Tetraodon nigroviridis]	122.0	[0..1]	[157..1]
gi\|90078666 - gi\|90078666\|dbj\|BAE89013.1\| unnamed protein product [Macaca fascicularis] NAT13_PONPY - N-acetyltransferase NAT13 - Pongo pygmaeus (Orangutan) NAA50_BOVIN - N-alpha-acetyltransferase 50 OS=Bos taurus GN=NAA50 PE=2 SV=1 gi\|109033096 - gi\|109033096\|ref\|XP_001106823.1\| PREDICTED: similar to Mak3 homolog isoform 2 [Macaca mulatta] gi\|123992977, gi... - gi\|123999903\|gb\|ABM87460.1\| N-acetyltransferase 13 [synthetic construct], gi\|123992977\|gb\|ABM84090.1... NAA50 - N(alpha)-acetyltransferase 50, NatE catalytic subunit NAA50_PONAB - N-alpha-acetyltransferase 50 OS=Pongo abelii GN=NAA50 PE=2 SV=1	122.0	[0..1]	[171..1]
gi\|110760049 - gi\|110760049\|ref\|XP_001119998.1\| PREDICTED: similar to separation anxiety CG12352-PA [Apis mellifera...	121.0	[0..1]	[155..1]
gi\|14590218, gi\|... - gi\|3256685\|dbj\|BAA29368.1\| 172aa long hypothetical acetyltransferase [Pyrococcus horikoshii OT3], gi... gi\|7451125 - pir\|\|A71455 probable acetyltransferase - Pyrococcus horikoshii	120.0	[0..6]	[157..20]

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Predicted Domain #1

Region A:
Residues: [1-184]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRSSIELGD VTPHNIKQLK KLNTVVFPVS YNDKFYVDVL EAGELAKLAY YNDIVVGAVC  60
   61 CRIDNTENQR RLYIMTLGCL SPYRRLGIGT VMFEHIMNFA EKDGNFDSIF LHVQINNNGA 120
  121 IEFYKKFGFE IVDTKEQYYK RIEPADAHVL QKTLRRTAPN SNSTATSTTA NSNSRSKARQ 180
  181 FTFV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	27.0
Match:	2ob0A
Description:	No description for 2ob0A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits