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View Structure Prediction Details

Protein: Cpr47Ee-PA
Organism: Drosophila melanogaster
Length: 369 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Cpr47Ee-PA.

Description E-value Query
Range
Subject
Range
CU30_BOMMO - Larval cuticle protein LCP-30 OS=Bombyx mori GN=LCP30 PE=1 SV=2
146.0 [0..8] [186..38]

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Predicted Domain #1
Region A:
Residues: [1-95]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVARTPRFR HLRWVACLLA SLWFSVSQAQ LPGTGFQGQR PQVPPLQPLQ QQANPFQRRQ  60
   61 PNPVQGQGLF PGQRNPLNPL APPLTGAALQ NPYTR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [96-187]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YNQYQQQNYV PITAYQNELN LDGSFSYGYS SADGTTAQAQ GYVKNLGYGE GVEAQVIQGS  60
   61 YSYTSPEGTP ITVRYIADEN GFRAEGTGIP SS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 22.130768
Match: PF00379.14
Description: No description for PF00379.14 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [188-369]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PQYFAGAQPY QQGLLNPNLN PYQTPFRQLP PPLPNAPFRP QLPGQQPLTP LQQQQQQQQQ  60
   61 QLQQQRGFQQ QQQPNSGQYQ PEQPFNQLHS GNLPGQYAGQ FGQQSFGSNL TAQQAQQQQN 120
  121 LNQQQQQQQQ QQQQQQQQQK EQQNEQQQQA LITQQLRGRP NNLVDPYGYN QYGRRFKKSP 180
  181 KK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.221849
Match: 2i1jA
Description: No description for 2i1jA was found.

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