YRC Public Data Repository - Protein Structure Prediction

Protein:	Cpr47Ed-PA
Organism:	Drosophila melanogaster
Length:	127 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Cpr47Ed-PA.

Description	E-value	Query Range	Subject Range
AGAP009875-PA - CPR77: cuticular protein RR-1 family (CPR77)\|protein_coding\|3R:44651286:44651883:-1\|gene:AGAP009875 gi\|158298840, gi... - gi\|58391952\|ref\|XP_318995.2\| ENSANGP00000014836 [Anopheles gambiae str. PEST], gi\|55236096\|gb\|EAA144...	146.0	[0..10]	[124..4]
gi\|91079648 - gi\|91079648\|ref\|XP_968350.1\| PREDICTED: similar to Cuticular protein 47Ef CG13214-PA [Tribolium cast...	144.0	[0..27]	[125..78]
gi\|108881215, gi... - gi\|157135292\|ref\|XP_001656586.1\| pupal cuticle protein 78E, putative [Aedes aegypti], gi\|108881215\|g...	142.0	[0..2]	[125..1]
gi\|125808726, gi... - gi\|54636022\|gb\|EAL25425.1\| GA15602-PA [Drosophila pseudoobscura], gi\|125808726\|ref\|XP_001360850.1\| G...	139.0	[0..2]	[125..56]
CUD2_SCHGR - Endocuticle structural glycoprotein SgAbd-2 OS=Schistocerca gregaria PE=1 SV=1	138.0	[0..17]	[124..9]

Back

Predicted Domain #1

Region A:
Residues: [1-127]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFALLLILTG CQLLWSCPAE CTSINVPVPI LKSVTEQLSS GSYLFSFESA DGTYREELGI  60
   61 VSSDSKTSDD DLEVSGIYRY INDWGQEVEV RYTADKNGFL PHVRYISKGE AYKPIRIEPL 120
  121 ALMGIHS

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	11.327902
Match:	PF00379.14
Description:	No description for PF00379.14 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.852	N/A	N/A	b.61.1	Avidin/streptavidin

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits