YRC Public Data Repository - Protein Structure Prediction

Protein:	Cpr47Eb-PA
Organism:	Drosophila melanogaster
Length:	214 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Cpr47Eb-PA.

Description	E-value	Query Range	Subject Range
gi\|125808726, gi... - gi\|54636022\|gb\|EAL25425.1\| GA15602-PA [Drosophila pseudoobscura], gi\|125808726\|ref\|XP_001360850.1\| G...	130.0	[0..4]	[136..60]
gi\|91079648 - gi\|91079648\|ref\|XP_968350.1\| PREDICTED: similar to Cuticular protein 47Ef CG13214-PA [Tribolium cast...	127.0	[0..32]	[132..78]
gi\|108881215, gi... - gi\|157135292\|ref\|XP_001656586.1\| pupal cuticle protein 78E, putative [Aedes aegypti], gi\|108881215\|g...	127.0	[0..2]	[132..1]
gi\|21627378, gi\|... - gi\|24653001\|ref\|NP_725147.1\| CG30045-PA [Drosophila melanogaster], gi\|21627378\|gb\|AAM68675.1\| CG3004...	121.0	[0..27]	[130..175]
gi\|119114027, gi... - gi\|119114027\|ref\|XP_318997.3\| ENSANGP00000014755 [Anopheles gambiae str. PEST], gi\|116118219\|gb\|EAA1...	120.0	[0..31]	[122..123]

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Predicted Domain #1

Region A:
Residues: [1-214]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKIAICLLA LVGGSLAASI GQVDSTTEKR EIVPLLRFET NKNPDGSFHF SYEGGDQSVR  60
   61 QEQGVIENAG TEDEALEVSG MYSYIDADGN TVEVHYTAGK NGFVPIGTII PKEITELAKS 120
  121 AALLPKVSED EQKYRKARSQ ELDNKEVAVE KEAAPVEKEE PVVAKESVVV EKSEPLPAES 180
  181 QVAPVQVVLD AAPQAEVKTA IEAETEKKVE TKTA

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	1.19
Match:	1q1qA
Description:	Crystal structure of human pregnenolone sulfotransferase (SULT2B1a) in the presence of PAP
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

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Top Sequence Alignment Hits