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View Structure Prediction Details

Protein: Git-PA
Organism: Drosophila melanogaster
Length: 731 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Git-PA.

Description E-value Query
Range
Subject
Range
gi|115746587 - gi|115746587|ref|XP_780674.2| PREDICTED: similar to ankyrin 2,3/unc44 [Strongylocentrotus purpuratus...
673.0 [0..3] [731..45]

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Predicted Domain #1
Region A:
Residues: [1-209]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCFASSIIEA HRKLFIAPPD LDHSDPATPT ISTRSKMPRG KSRLQTEVCG DCGAGDPSWA  60
   61 SINRGILLCA DCCSVHRSLG RHISIVKSLR QGNWEPSVLN FVNSLNAHGA NSVWEHHLLD 120
  121 GSTNSTGGKH VPRWRKPTPK DALHPTKSDF IKAKHVNLTF VLKPSLQDDD DGNGSAGCLE 180
  181 QELSRQLHAS VRTSNLETSL RFLVQGADP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.39794
Match: 2b0oE
Description: Crystal structure of UPLC1 GAP domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [210-609]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NYYHEDKLST PLHMAAKFGQ ASQIEMLLIY GADVNALDGN GMTPLELARA NNHNTIAERL  60
   61 LDAMYDVTDR IITFLGGKKP DHASGRHMII PDANGADISE QLKIARGKLQ LVPNKMFEEL 120
  121 VMDLYDEVDR RECEAIWSTS TLNADHATVP FLPANPFLSA TRNQGRQKLA RFNRAEFTGL 180
  181 LTDVLVDAMR RQNMANLRPM DAPVAGHQSL QSLPYANNSM LLGSFEQGGH DPNLSDDEPI 240
  241 YDPVASDDDY APVPPMAQQA IVHTPPRSAN SHNEMETLRK QLNDYKSEIN QLKNVVQMLS 300
  301 SENTQLKSKF SSASNNSVYD EPLRIDLSLS SPDTEHEPLS LPEGGTANGE SGSSNDSSNQ 360
  361 STIKRPASMY ERRLVPNVAK GNTDIRNTTS MYQMAGDGKP 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 77.522879
Match: 1n11A
Description: Ankyrin-R
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [610-731]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FGEEVKVRSD LVTRRLKELI RAMQPVPEDQ KQSIAPHGEL IRSAVTDLIA LYANLPPNAS  60
   61 DPSRETLKLL TRQNILIQHE CENLQKAIEA DDKQAIQKNT LEVRDCAFHI ASAIKTLVLQ 120
  121 FY

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.01
Match: 1k04A
Description: FAT domain of focal adhesion kinase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle