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View Structure Prediction Details

Protein: Syb-PB
Organism: Drosophila melanogaster
Length: 132 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Syb-PB.

Description E-value Query
Range
Subject
Range
gi|113547541, gi... - gi|215697298|dbj|BAG91292.1| unnamed protein product [Oryza sativa Japonica Group], gi|115450939|ref...
gi|125542540 - gi|125542540|gb|EAY88679.1| hypothetical protein OsI_10154 [Oryza sativa Indica Group]
135.0 [0..10] [130..93]

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Predicted Domain #1
Region A:
Residues: [1-132]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENNEAPSPS GSNNNDFPIL PPPPNANDNY NQFGDHQIRN NNAAQKKLQQ TQAKVDEVVG  60
   61 IMRVNVEKVL ERDQKLSELG ERADQLEQGA SQFEQQAGKL KRKQWWANMK MMIILGVIAV 120
  121 VLLIIVLVSL FN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.69897
Match: 1sfcA
Description: Synaptobrevin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle