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View Structure Prediction Details

Protein: CG12128-PA
Organism: Drosophila melanogaster
Length: 485 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG12128-PA.

Description E-value Query
Range
Subject
Range
gi|21428350 - gi|21428350|gb|AAM49835.1| GM02932p [Drosophila melanogaster]
765.0 [0..1] [485..1]

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Predicted Domain #1
Region A:
Residues: [1-378]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTMLAAPTA SSNGRPIGPH KSWKKVNEER KALKRQRKQD KLLKELQQAK EAESQAGKAA  60
   61 NEVQAKDKPN PSTLSIAVPG SILENAQSNE LRAYVAGQIA RAACIFRVNE VIVFDDVGIA 120
  121 TARETKRSYE ADGEGSSTGT VRSSSLQLAR ILQYLECPQY LRKYFFPLHK DLKYSGLLNP 180
  181 LDTPHHLRQQ SKFRYREGVI CDKKAKEGHS YANVGLLNDV LVDKAIEPGV RVTVKMEPQS 240
  241 ESCRKQRGTL VSPDEPRRET GVYWGYQVRI AHSMSEIFTK SPYATGYDVT VGTSDRGTNV 300
  301 HEVPNRSYNF NHMLIVFGGL QGLESALAND EKLTVDDPEL LFDHYVNVLP RQGSRTIRTE 360
  361 EALLIALAAL QEKLQPQV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 67.154902
Match: 1k3rA
Description: Hypothetical protein MTH1 (MT0001), insert domain; Hypothetical protein MTH1 (MT0001), dimerisation domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [379-485]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ADVEIDLTDL LPKSEDSGIA VRRDVLVSKK QKKRKQVEDT PDETVVDEPS FSKPLPKVAR  60
   61 LTANPFADSS EELAKNTPAQ DDFEVVSSTT VSGTSHSCAD DDLSRFD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle