YRC Public Data Repository - Protein Structure Prediction

Protein:	CG15863-PA
Organism:	Drosophila melanogaster
Length:	132 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG15863-PA.

Description	E-value	Query Range	Subject Range
gi\|73992122 - gi\|73992122\|ref\|XP_534380.2\| PREDICTED: similar to p53 and DNA damage-regulated protein [Canis famil...	180.0	[0..1]	[129..31]
PDRG1_MOUSE - p53 and DNA damage-regulated protein 1 OS=Mus musculus GN=Pdrg1 PE=2 SV=1	178.0	[0..1]	[129..1]
gi\|51980327 - gi\|51980327\|gb\|AAH82021.1\| P53 and DNA damage regulated 1 [Rattus norvegicus]	178.0	[0..1]	[129..12]
gi\|27374248 - gi\|27374248\|gb\|AAO01007.1\| CG15863-PA [Drosophila erecta]	171.0	[0..1]	[132..1]
gi\|7594598 - gi\|7594598\|emb\|CAB88101.1\| OTTHUMP00000030569 [Homo sapiens]	159.0	[0..1]	[129..17]
gi\|54636407, gi\|... - gi\|54636407\|gb\|EAL25810.1\| GA13989 [Drosophila pseudoobscura pseudoobscura], gi\|125809769\|ref\|XP_001... gi\|54636407\|gb\|E... - GA13989-PA [Drosophila pseudoobscura], GA13989 [Drosophila pseudoobscura pseudoobscura]	153.0	[0..1]	[131..1]
PDRG1_PONAB - p53 and DNA damage-regulated protein 1 OS=Pongo abelii GN=PDRG1 PE=2 SV=1 PDRG1_PONPY - p53 and DNA damage-regulated protein 1 - Pongo pygmaeus (Orangutan)	150.0	[0..1]	[129..1]
PDRG1_BOVIN - p53 and DNA damage-regulated protein 1 OS=Bos taurus GN=PDRG1 PE=2 SV=1	149.0	[0..1]	[129..1]

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Predicted Domain #1

Region A:
Residues: [1-132]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQTDLNKSI EIITKTEELA DKILVNKQEL TVMDKRRQET RQAMRLMEKS EDKKVWITIG  60
   61 SMLVKMEREK ALELLKKDQQ KIEQQINLIY SDQKVLVNKH RDLEFKSPFS GTHLKPLEKK 120
  121 EFDALKANLP LL

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	0.952
Match:	1fxkC
Description:	Prefoldin alpha subunit
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits