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View Structure Prediction Details

Protein: lectin-46Cb-PB
Organism: Drosophila melanogaster
Length: 322 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lectin-46Cb-PB.

Description E-value Query
Range
Subject
Range
gi|189521619, gi... - gi|68364112|ref|XP_686182.1| PREDICTED: similar to aggrecan 1 [Danio rerio], gi|189521619|ref|XP_686...
173.0 [0..9] [224..1278]

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Predicted Domain #1
Region A:
Residues: [1-173]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHLLTALVA LLSILPRGEL LGSGPPCPRR YLRRINGKCY YFSVKKMNWF GALNNCLRKG  60
   61 LTLADLSNQR DFDGAIGFLS GLGNTEDFWF GGNDLYHEGR FQYISNGRLV RYYSNYSNVL 120
  121 PLEHSECDDC LEVRIRSEIN MVSADNCHER QYFICSERYC QGTDSGKKPK HHS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.522879
Match: 2b6bD
Description: Cryo EM structure of Dengue complexed with CRD of DC-SIGN
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [174-322]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HEHLHHFHHD IGGSAEGEDD GDGDGDHDRQ DPIASGSVEH PEPDSEDAVG ALDVPDDDQP  60
   61 GQNGVSVTPG AEETNTVGGT GEPGATATPA AGAEAVSPAA EGAAPAGAAP AAEGAATPAA 120
  121 DGATPAPTPA PGAEAPAAAA AETPAPPAA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.52
Match: 2j63A
Description: No description for 2j63A was found.

YRC Informatics Platform - Version 3.0
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