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View Structure Prediction Details

Protein: CG1698-PA, FBpp0...
Organism: Drosophila melanogaster
Length: 654 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG1698-PA, FBpp0....

Description E-value Query
Range
Subject
Range
gi|73988924 - gi|73988924|ref|XP_854917.1| PREDICTED: similar to Sodium- and chloride-dependent glycine transporte...
585.0 [0..9] [644..233]

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Predicted Domain #1
Region A:
Residues: [1-654]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METTINNNNN DNGYMNQAYV GSLNASTISI PGAYKPNESS NGKKTLSEGS GSAPPPGHGD  60
   61 SPSGVEAGQP GKKRDSWNND IEFLMSCIAL SVGLGNVWRF PFTALENGGG AFVIPYLIVL 120
  121 ILVGKPVYYL EMLLGQFSSR GSVKVYDFSP IMRGIGYGQV LATGIVTTYY ATLMALTLRY 180
  181 FVDSFYPTLP WSYCREEWGT ECLDSGPQEA SRATSLAGSG VRTTSAEFYF TNIILREKAS 240
  241 IDDGIGYPSW SLALALAVAW IVIAGIMFKG VKSSGKASYF LALFPYVVML VLLVRALTLP 300
  301 GAFDGVLYFL RPQWHKLLEP QVWYAAVTQV FFSLAICFGN IIMYASYNRF GHNIYRDANI 360
  361 VTTLDTFTSL LSGVIIFGIL GNLAYENNTT DIASVVNGGP GLAFISYPDA IAKFKWLPQL 420
  421 FSVLFFLMLF VLGIGSNVGM ASCMSTVIKD QFGHLKNWTV VVGIAIVGYF LGLLYITPGG 480
  481 QFLLNLVDYF GVTFVALVLA IFELVTIAWI YGVKRLCRDV EFMIGIKTSL YYRICWAVVT 540
  541 PLLMLTILIY TLVLYEPLKY KDYTYQSGVY VFGWCLSAFG VGQVLFWAIP AVRKQPSHLG 600
  601 LWARIRKAFE PLPNWGPSDP QTLKRYQLFV QEGNANALFR RSSIWHKIYD NIFG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.69897
Match: 2a65A
Description: Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle