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View Structure Prediction Details

Protein: Map60-PA
Organism: Drosophila melanogaster
Length: 440 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Map60-PA.

Description E-value Query
Range
Subject
Range
gi|1098965 - gi|1098965|gb|AAB00184.1| CP60
733.0 [0..1] [440..1]

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Predicted Domain #1
Region A:
Residues: [1-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIQLDKILQ DIAKEKVLHP NNGGASKQEQ EEAWARIGRL NKLSVHESRS IFIVLQKKYE  60
   61 QEKLKGNSAW KLFSLMHQIH QEPKISIKEE NDQVPMEEVE EYEMLEVQEP EDEDDAHQYG 120
  121 QHTNSTGSAS SDGESPTKSH ST

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [143-275]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSPEKDERLA YAKPNVDTPR PAIEEKKLLN TLANNTPRSS SLSAAAAVLQ KKGITVKKTP  60
   61 SSAAAPKPAI GQQAPASGQR SSSSRTTIQL PDSLKRKLSE EYTSSSAQKK QTKTTSPKQA 120
  121 ASSAAATSVH TSV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [276-440]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PDQLPAGNNV VHTTTAQLMQ VKKEREDNQT PPPGINIITI PSAQQINGGG GGANSSTAAT  60
   61 IASTSVASTN GFSPHIDELD FKNDIIFGPK INAASSNTPE IINLGNFDNS LPPTFFKNLC 120
  121 NSSRHESLGL YVANVMNRLS SRASAKLELS ILRAILDVQS DELEQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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