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View Structure Prediction Details

Protein: Or45b-PA
Organism: Drosophila melanogaster
Length: 396 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Or45b-PA.

Description E-value Query
Range
Subject
Range
gi|125811027|ref... - GA11917-PA [Drosophila pseudoobscura], Or45b [Drosophila pseudoobscura pseudoobscura]
gi|54636900, gi|... - gi|54636900|gb|EAL26303.1| Or45b [Drosophila pseudoobscura pseudoobscura], gi|125811027|ref|XP_00136...
205.0 [0..1] [396..1]

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Predicted Domain #1
Region A:
Residues: [1-243]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYPRFLSRNY PLAKHLFFVT RYSFGLLGLR FGKEQSWLHL LWLVFNFVNL AHCCQAEFVF  60
   61 GWSHLRTSPV DAMDAFCPLA CSFTTLFKLG WMWWRRQEVA DLMDRIRLLI GEQEKREDSR 120
  121 RKVAQRSYYL MVTRCGMLVF TLGSITTGAF VLRSLWEMWV RRHQEFKFDM PFRMLFHDFA 180
  181 HRMPWFPVFY LYSTWSGQVT VYAFAGTDGF FFGFTLYMAF LLQALRYDIQ DALKPIRDPS 240
  241 LRE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [244-396]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKICCQRLAD IVDRHNEIEK IVKEFSGIMA APTFVHFVSA SLVIATSVID ILLYSGYNII  60
   61 RYVVYTFTVS SAIFLYCYGG TEMSTESLSL GEAAYSSAWY TWDRETRRRV FLIILRAQRP 120
  121 ITVRVPFFAP SLPVFTSVIK FTGSIVALAK TIL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle