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View Structure Prediction Details

Protein: CG2063-PA
Organism: Drosophila melanogaster
Length: 325 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG2063-PA.

Description E-value Query
Range
Subject
Range
gi|114670506 - gi|114670506|ref|XP_001145390.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
gi|21754486, gi|... - gi|21754486|dbj|BAC04514.1| unnamed protein product [Homo sapiens], gi|119609706|gb|EAW89300.1| SAP3...
262.0 [0..65] [324..9]

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Predicted Domain #1
Region A:
Residues: [1-158]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALASLTAQ YTDSENEGDA SPDSQNSTAS LVIIPPKRPT PTPTKQDEES KRSKEKKKKR  60
   61 AKKVRRLVSY QDDTLISDED EDRAAASSSE EESSSGDESN SSNSQSEDSP KAKDKSNAGS 120
  121 GSKDGDTPME VDEEPACFPV EERTAESYEK DAKYAKYK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [159-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FQLPPEPKGK PSAELVAKIT KMYTKMNQTN MDMNRVIQDR KEFRNPSIYD KLISFCDINE  60
   61 FGTNYPPEIY DPLQWGEESY YESLAAVQKT EMVKRQKDRK DMDKVEQATA LARKVEEEAK 120
  121 KRKSKWDQPA PSSTVVKTTL PALTTTVTGT KGTVISAFGS LPKKPAV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 43.267606
Match: PF07818.4
Description: No description for PF07818.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle