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View Structure Prediction Details

Protein: CG8029-PA, CG8029-PB
Organism: Drosophila melanogaster
Length: 379 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8029-PA, CG8029-PB.

Description E-value Query
Range
Subject
Range
gi|54636229|gb|E... - GA20777-PA [Drosophila pseudoobscura], GA20777 [Drosophila pseudoobscura pseudoobscura]
gi|54636229, gi|... - gi|54636229|gb|EAL25632.1| GA20777 [Drosophila pseudoobscura pseudoobscura], gi|125809271|ref|XP_001...
426.0 [0..1] [379..1]

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Predicted Domain #1
Region A:
Residues: [1-171]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLWKSLIALC VIGAAVAEQT PVFLWGANSV AKPSLKTVSQ VEFAEQLAAL LEDHMVVAFE  60
   61 ENGLSSKDFL CSNSQAQSCY AQLQGVSPKT YYTSVENPSE ALRSVAAKRE HNSIDASGKL 120
  121 TTPAKCAVGT ALFVTFEDAA ESREASLESH DAAIAAISKQ FECKVAYLYL A

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [172-379]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APSTAPVVQR RTRRDTAATT GGIMWKSTNQ FQIFYTALLY NGNPITVTDL KLTNSSSTKL  60
   61 SVVMDTSVAD KPITFDVVYN GGYFSLSNLV YDNNNFRSSG VNAPTTFSYS CGNLTLESAA 120
  121 VNNMYNTLSF KSLQLQAPFD GTYKEDFPFG DSWDCVGFVT PGILMGLFVV ALLLVIMFVG 180
  181 VCWMMDINTM DRFDDPKGKT ITINAAAE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle