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View Structure Prediction Details

Protein: Prp38-PA
Organism: Drosophila melanogaster
Length: 330 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Prp38-PA.

Description E-value Query
Range
Subject
Range
gi|47212452 - gi|47212452|emb|CAF94104.1| unnamed protein product [Tetraodon nigroviridis]
257.0 [0..1] [219..1]

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Predicted Domain #1
Region A:
Residues: [1-202]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANRTVKEAK NVHGTNPQYL IEKIIRSRIY DSKYWKEQCF ALTAELLVDK AMELRFVGGV  60
   61 YGGNIKPTQF LCLTLKMLQI QPEKDIVVEF IKNEEFKYVR ALGAFYLRLT GAALDCYKYL 120
  121 EPLYIDNRKL RRQNRAGQFE IVYMDEYIDE LLRNDRVCDI ILPRIQKRSI LEENNEIEPK 180
  181 VSVLDEDLDD ELPSDEEKAD ET

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 80.113509
Match: PF03371.6
Description: No description for PF03371.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [203-330]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NRPKENSTAV RRPRRVRSKS RSRSRERERR SGQGNSARSR DYYDELEDYD RQRNRVRNRD  60
   61 THNEDYDRRQ NNGRHDRERE RQDRDSIRER ERDGDRDRRD RERERERDRG RHDQRERDSR 120
  121 GERDRRRY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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