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View Structure Prediction Details

Protein: CG8777-PA
Organism: Drosophila melanogaster
Length: 1233 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8777-PA.

Description E-value Query
Range
Subject
Range
gi|113477431, gi... - gi|71673743|ref|ZP_00671491.1| TPR repeat:TPR-related region [Trichodesmium erythraeum IMS101], gi|7...
586.0 [0..4] [1232..257]

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Predicted Domain #1
Region A:
Residues: [1-488]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAVKESKAL IKDIRETIKL GKHAEAIPKC QRLLKSEPEN AMGYLLLGAA YQNIDKAEAA  60
   61 KNLRQCIKCT DGPAPAALLG LANCAPSNEL PEIYDQLADL QPEQSLNYWE KLFNLASDSN 120
  121 VAPFCFTVLK KRVQDTENGN FTKIQEYLGR IWVSNDFEIA PEDTQLYKTT MEALLQNSEP 180
  181 SARSVVYKRY LKWLYKKQDY ETCVRHACNM TESHPKDVYG FEWICKTYCE HHEQSEIVSW 240
  241 QQELRHPIQV YAEQLLELNP NSNLALLVKA LDLFAEGQVV ASRQLALQAQ KSQPAYKVTL 300
  301 ELLARIHMEL GAYKLALQLW QEIGQENDAY ALCLSHEKGV SKLREAVTIL QTLENSEGNI 360
  361 KSLARCYFKL GELHLLKDLP LDDLTKAEFV LSPSEALQEI ADCKTFEAYL LCGKLHMALK 420
  421 NYSDALNYVL KATRLRPHFA ECFDYLGKLY PLATGDFSRA RKCYEKCISL NPLAEEAVDA 480
  481 LSFIYQEQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.69897
Match: 2gw1A
Description: No description for 2gw1A was found.

Predicted Domain #2
Region A:
Residues: [489-692]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GEEELNETLL LNTLSHLGSN ESIRLQYKLG LHFSHVKKWD SAIQCFRIAI KNDSRCISYW  60
   61 ESLGDAYAGR GSYNSAIRVF QKILELSPEN NYALLQIASV KTTIRMYTES IEDYDTLLQR 120
  121 NPTYLPGLRG AAEAHIGIAN SLKSQNLYGR SKAHFQLALE HLQSAFLQRE AQGMVWLWRL 180
  181 SANIFVQTAQ LPHSLANLDV AGNL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.69897
Match: 1w3bA
Description: The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [693-922]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AKREEPIAYL SRKDLLQLAQ RFYLCALKLK QNTYLWYELS LASYYSAILI PEDANGHLET  60
   61 ATKACKMAIK ECSNRWQNWN LLGVINMNSE NENLPLAQHC FIQAVVLEKK CYTAWTNLGV 120
  121 LYIKLNEVRL ANEAFTRAQQ SSPVYANAWI GQAMVAELIG DREEAFDLFR HCQQFDYHPE 180
  181 AALGFAHWVC EMLSTPGSFD KPRIKHAIEH MYADVLALDA INWYVQNEET 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.69897
Match: 1kt0A
Description: FKBP51, C-terminal domain; FKBP51, N-terminal domains
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.787280988128024 bayes_pls_golite062009
protein binding 0.212989569759479 bayes_pls_golite062009
hydrolase activity 0.142615944899055 bayes_pls_golite062009

Predicted Domain #4
Region A:
Residues: [923-1046]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DATPASLSFQ GFLYARKNLY RQAIEAFTRA CKLCEPGADR DKLYTNLGYL YLKIDQPEQA  60
   61 AHALNTVAHA TFKPIIGLAQ AYYLAGQLQE SYSIYNSVLG NVVDHGDDKA ATILVAMASM 120
  121 IYDF

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.97
Match: 2dbaA
Description: No description for 2dbaA was found.

Predicted Domain #5
Region A:
Residues: [1047-1233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QGEADTKTLL YQCVLLKEVP IQALFSALAL GILHRDNALI HTILTELNAY AFKKEYCADI  60
   61 SYLTAHYILI NEGARRALCY LQTRIRMFPN SRSLRSVVLK FLLDYFSDDQ SYRLATSNMG 120
  121 RITLTLGHTK QQNSILASEE ALTTIYASQA VSAVDKTCSM KLLQRAILLS PTDQRARQLL 180
  181 SAIIANS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.39794
Match: 1o1rA
Description: Protein farnesyltransferase alpha-subunit
Matching Structure (courtesy of the PDB):

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